RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 A0A0A6YYH2 397 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TRAV38-1A0A0B4J264 116 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 A6NJ64 397 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 OR2AT4A6NND4 320 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CLDN25C9JDP6 229 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SH2D1BO14796 132 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 DEGS1O15121 323 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 XRCC3O43542 346 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SSX4O60224 188 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 GABRR1P24046 479 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 DNASE1P24855 282 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PRDX2P32119 198 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SIGIRRQ6IA17 410 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 RAB12Q6IQ22 244 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CNIH2Q6PI25 160 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CCDC190Q86UF4 302 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 DTX3Q8N9I9 347 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 OR4M1Q8NGD0 313 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 OR10R2Q8NGX6 335 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ANGPTL6Q8NI99 470 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SOSTQ9BQB4 213 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 NUDT16L1Q9BRJ7 211 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 IFT22Q9H7X7 185 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 BEX4Q9NWD9 120 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ZNF581Q9P0T4 197 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 EXTL2Q9UBQ6 330 aa13.68□□□□□ -0.22
CDK5RAP3-228ENST00000583363 IGKV1D-17A0A075B6S4 117 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 H3BUI4 141 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SCGNO76038 276 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 HAND1O96004 215 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 AMY2BP19961 511 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CDK2P24941 298 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 LMO1P25800 156 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 BLVRBP30043 206 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 BTG1P62324 171 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SCN1BQ07699 218 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ZMYND11Q15326 602 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ATPAF1Q5TC12 328 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 STUMQ69YW2 141 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 Q6ZTK2 550 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PEG10Q86TG7 708 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CD177Q8N6Q3 437 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 RAB1CQ92928 201 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PHF21AQ96BD5 680 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 MBD6Q96DN6 1003 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 OR14J1Q9UGF5 321 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ZNF222Q9UK12 451 aa13.67□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PPIHO43447 177 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 OR7C1O76099 320 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 OR2H2O95918 312 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 IGHV2-70P01814 119 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 GYPAP02724 150 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FUT3P21217 361 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 GIFP27352 417 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ETV6P41212 452 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 GABRA2P47869 451 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CEBPDP49716 269 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PDLIM4P50479 330 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 IKZF1Q13422 519 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 LSAMPQ13449 338 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 DEFB113Q30KQ7 82 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PLAC9Q5JTB6 97 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 IZUMO1Q8IYV9 350 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ZNF525Q8N782 197 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CHST4Q8NCG5 386 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PERPQ96FX8 193 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TIMD4Q96H15 378 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 NEDD4LQ96PU5 975 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 RCC2Q9P258 522 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ARID1AO14497 2285 aa13.66□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TRAV18A0A075B6X5 111 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TRAV24A0A0B4J272 114 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FABP12A6NFH5 140 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 NDUFA2O43678 99 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PDCD6O75340 191 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TPPPO94811 219 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 HLA-DQB1P01920 261 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TFF1P04155 84 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ZNF44P15621 663 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CHATP28329 748 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TALDO1P37837 337 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 MDH2P40926 338 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 KCNJ8Q15842 424 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CARTPTQ16568 116 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CDNFQ49AH0 187 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ATAD3CQ5T2N8 411 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 AVPI1Q5T686 147 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ZNF788Q6ZQV5 615 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 LRRC75A-AS1Q8N1F1 130 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 RAB3CQ96E17 227 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SDSLQ96GA7 329 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ARHGAP5-AS1Q96IT6 56 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TMEM246Q9BRR3 403 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PECRQ9BY49 303 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 DNTTIP1Q9H147 329 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SPACA1Q9HBV2 294 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PLEKHJ1Q9NW61 149 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 METRNQ9UJH8 293 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 HSF4Q9ULV5 492 aa13.65□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SIRPB1O00241 398 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms