RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 GMFBP60983 142 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 LMO4P61968 165 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 MRPS10P82664 201 aaKnown RBP12.97□□□□□ -0.33
SS18-216ENST00000580751 HOXA4Q00056 320 aaPredicted RBP12.97□□□□□ -0.33
SS18-216ENST00000580751 PYHIN1Q6K0P9 492 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 CNIH2Q6PI25 160 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 NLRC3Q7RTR2 1065 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 LINC00596Q86U02 117 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 FAM90A1Q86YD7 464 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 CMTM4Q8IZR5 234 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 MFSD4AQ8N468 514 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 FAM89BQ8N5H3 189 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 C19orf18Q8NEA5 215 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 OR56B1Q8NGI3 324 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 OR5D18Q8NGL1 313 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 FAM46BQ96A09 425 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 RFT1Q96AA3 541 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 TMEM59Q9BXS4 323 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 WDR13Q9H1Z4 485 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 EXTL2Q9UBQ6 330 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 MIOXQ9UGB7 285 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.97□□□□□ -0.331e-8■■■■□ 23.5
SS18-216ENST00000580751 ABCA2Q9BZC7 2435 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 TEP1Q99973 2627 aaKnown RBP12.96□□□□□ -0.33
SS18-216ENST00000580751 CTDSPLO15194 276 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 NXPH2O95156 264 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 EIF4EP06730 217 aaKnown RBP12.96□□□□□ -0.33
SS18-216ENST00000580751 IL2RGP31785 369 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 PITPNBP48739 271 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 PPP5CP53041 499 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 FGF12P61328 243 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 RPS27AP62979 156 aaKnown RBP12.96□□□□□ -0.33
SS18-216ENST00000580751 UNC119Q13432 240 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 SLC22A6Q4U2R8 563 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 C1QL2Q7Z5L3 287 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 GDPD1Q8N9F7 314 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 OR51T1Q8NGJ9 327 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 SLAMF9Q96A28 289 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 SEBOXQ9HB31 216 aaPredicted RBP12.96□□□□□ -0.33
SS18-216ENST00000580751 ELL3Q9HB65 397 aaPredicted RBP12.96□□□□□ -0.33
SS18-216ENST00000580751 PATZ1Q9HBE1 687 aaKnown RBP12.96□□□□□ -0.33
SS18-216ENST00000580751 HES4Q9HCC6 221 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 PALMDQ9NP74 551 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 MTCH1Q9NZJ7 389 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 NLKQ9UBE8 527 aa12.96□□□□□ -0.33
SS18-216ENST00000580751 ABCA1O95477 2261 aa12.96□□□□□ -0.34
SS18-216ENST00000580751 IGHV3OR15-7A0A075B7D8 119 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 F5H0A9 414 aaPredicted RBP12.95□□□□□ -0.34
SS18-216ENST00000580751 SPRY1O43609 319 aaPredicted RBP12.95□□□□□ -0.34
SS18-216ENST00000580751 CRTAPO75718 401 aaPredicted RBP12.95□□□□□ -0.34
SS18-216ENST00000580751 MGMTP16455 207 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 ERVK11-1P61568 191 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 STUMQ69YW2 141 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 FIP1L1Q6UN15 594 aaKnown RBP12.95□□□□□ -0.34
SS18-216ENST00000580751 ACP7Q6ZNF0 438 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 RNF144BQ7Z419 303 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 BIVMQ86UB2 503 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 OSR2Q8N2R0 312 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 OR8B3Q8NGG8 313 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 NEIL1Q96FI4 390 aaPredicted RBP12.95□□□□□ -0.34
SS18-216ENST00000580751 C1orf159Q96HA4 380 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 ZNF488Q96MN9 340 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 OR8B2Q96RD0 313 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 CCDC32Q9BV29 185 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 DNTTIP1Q9H147 329 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 LPAR5Q9H1C0 372 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 ATG5Q9H1Y0 275 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 V9GYH0 126 aa12.95□□□□□ -0.34
SS18-216ENST00000580751 IGKV1-12A0A0C4DH73 117 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 NKX6-3A6NJ46 265 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 OR2AT4A6NND4 320 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 B4DSR2 109 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 ANGPTL7O43827 346 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 MPIG6BO95866 241 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 IGKV1D-12P01611 117 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 GYPAP02724 150 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 IGHV4-31P0DP07 118 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 IL13RA2Q14627 380 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 MPV17LQ2QL34 196 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 ESCO2Q56NI9 601 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 TMEM69Q5SWH9 247 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 FAM131AQ6UXB0 335 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 SLC36A1Q7Z2H8 476 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 TMEM104Q8NE00 496 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 OR4M1Q8NGD0 313 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 ZFAND2BQ8WV99 257 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 BORCS5Q969J3 196 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 SEH1LQ96EE3 360 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 Q96M66 194 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 SPACA1Q9HBV2 294 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.94□□□□□ -0.34
SS18-216ENST00000580751 KAAG1Q9UBP8 84 aa12.94□□□□□ -0.34
SS18-216ENST00000580751 RAB27BO00194 218 aa12.93□□□□□ -0.34
SS18-216ENST00000580751 TMPRSS2O15393 492 aa12.93□□□□□ -0.34
SS18-216ENST00000580751 ADAM20O43506 726 aa12.93□□□□□ -0.34
SS18-216ENST00000580751 CA11O75493 328 aa12.93□□□□□ -0.34
SS18-216ENST00000580751 HTR3BO95264 441 aa12.93□□□□□ -0.34
SS18-216ENST00000580751 KNG1P01042 644 aa12.93□□□□□ -0.34
SS18-216ENST00000580751 GLAP06280 429 aa12.93□□□□□ -0.34
SS18-216ENST00000580751 SFTPBP07988 381 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms