RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 TMEM249Q2WGJ8 235 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 C2orf76Q3KRA6 126 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 IDNKQ5T6J7 187 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 CIARTQ8N365 385 aaPredicted RBP14.22□□□□□ -0.13
NUP88-210ENST00000574867 URM1Q9BTM9 101 aaKnown RBP14.22□□□□□ -0.13
NUP88-210ENST00000574867 SSBP3Q9BWW4 388 aaPredicted RBP14.22□□□□□ -0.13
NUP88-210ENST00000574867 MAB21L2Q9Y586 359 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 VPS13CQ709C8 3753 aa14.22□□□□□ -0.13
NUP88-210ENST00000574867 A0A1B0GW55 424 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 H3BUI4 141 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 LDLRAD4O15165 306 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 GPR37O15354 613 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 TFF1P04155 84 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 DUX4L2P0CJ85 424 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 DUX4L3P0CJ86 424 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 DUX4L4P0CJ87 422 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 DUX4L5P0CJ88 424 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 DUX4L6P0CJ89 424 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 DUX4L7P0CJ90 424 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 LMO1P25800 156 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 GNB2P62879 340 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 FAM189A2Q15884 450 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 C11orf91Q3C1V1 193 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 OR10K2Q6IF99 312 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 DUX4L9Q6RFH8 374 aaPredicted RBP14.21□□□□□ -0.13
NUP88-210ENST00000574867 ZNF841Q6ZN19 808 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 ASCC1Q8N9N2 400 aaKnown RBP14.21□□□□□ -0.13
NUP88-210ENST00000574867 MAPK1IP1LQ8NDC0 245 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 TMEM185AQ8NFB2 350 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 PPP1R35Q8TAP8 253 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 PTX4Q96A99 478 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 KCNK15Q9H427 330 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 SPACA1Q9HBV2 294 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 DUX4Q9UBX2 424 aa14.21□□□□□ -0.13
NUP88-210ENST00000574867 RSL24D1Q9UHA3 163 aaKnown RBP14.21□□□□□ -0.13
NUP88-210ENST00000574867 FLNAP21333 2647 aaKnown RBP14.21□□□□□ -0.13
NUP88-210ENST00000574867 DVL1O14640 695 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 GEMIN2O14893 280 aaKnown RBP14.21□□□□□ -0.14
NUP88-210ENST00000574867 DEGS1O15121 323 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 FOXH1O75593 365 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 OR7C1O76099 320 aaPredicted RBP14.21□□□□□ -0.14
NUP88-210ENST00000574867 RAB6AP20340 208 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 GZMKP49863 264 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 SEC61A1P61619 476 aaKnown RBP14.21□□□□□ -0.14
NUP88-210ENST00000574867 SPCS2Q15005 226 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 WDR25Q64LD2 544 aaPredicted RBP14.21□□□□□ -0.14
NUP88-210ENST00000574867 Q6P435 159 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 ZNRF1Q8ND25 227 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 KCTD12Q96CX2 325 aaKnown RBP14.21□□□□□ -0.14
NUP88-210ENST00000574867 C18orf12Q96KH6 178 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 TM2D1Q9BX74 207 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 ABRACLQ9P1F3 81 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 SLC25A10Q9UBX3 287 aaPredicted RBP14.21□□□□□ -0.14
NUP88-210ENST00000574867 METRNQ9UJH8 293 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 ETV7Q9Y603 341 aa14.21□□□□□ -0.14
NUP88-210ENST00000574867 TMEM272A0A1B0GTI8 110 aa14.2□□□□□ -0.14
NUP88-210ENST00000574867 B4DSR2 109 aa14.2□□□□□ -0.14
NUP88-210ENST00000574867 SIRPB1O00241 398 aa14.2□□□□□ -0.14
NUP88-210ENST00000574867 SMAD7O15105 426 aaKnown RBP14.2□□□□□ -0.14
NUP88-210ENST00000574867 ZNF737O75373 536 aa14.2□□□□□ -0.14
NUP88-210ENST00000574867 RORCP51449 518 aa14.2□□□□□ -0.14
NUP88-210ENST00000574867 TAF9Q16594 264 aa14.2□□□□□ -0.14
NUP88-210ENST00000574867 SNX22Q96L94 193 aa14.2□□□□□ -0.14
NUP88-210ENST00000574867 OR5V1Q9UGF6 321 aa14.2□□□□□ -0.14
NUP88-210ENST00000574867 RAB22AQ9UL26 194 aa14.2□□□□□ -0.14
NUP88-210ENST00000574867 A0A0B4J203 849 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 FAM157AC9JC47 383 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 K7N7A8 449 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 TK1P04183 234 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 SELLP14151 372 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 GABRR1P24046 479 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 SCN1BQ07699 218 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 OR8H2Q8N162 312 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 OR5D13Q8NGL4 314 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 LGALS14Q8TCE9 139 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 ST8SIA4Q92187 359 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 ABCA2Q9BZC7 2435 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 SLC33A1O00400 549 aaPredicted RBP14.19□□□□□ -0.14
NUP88-210ENST00000574867 IGHV4-31P0DP07 118 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 SNRPBP14678 240 aaKnown RBP14.19□□□□□ -0.14
NUP88-210ENST00000574867 FOSL1P15407 271 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 DYNC1I2Q13409 638 aaKnown RBP14.19□□□□□ -0.14
NUP88-210ENST00000574867 CD276Q5ZPR3 534 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 C17orf107Q6ZR85 190 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 LINC01356Q8N9X3 169 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 AP3S1Q92572 193 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 TMUB1Q9BVT8 246 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 BARHL1Q9BZE3 327 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 LPAR5Q9H1C0 372 aa14.19□□□□□ -0.14
NUP88-210ENST00000574867 RCC2Q9P258 522 aaKnown RBP14.19□□□□□ -0.14
NUP88-210ENST00000574867 POLR3KQ9Y2Y1 108 aaPredicted RBP14.19□□□□□ -0.14
NUP88-210ENST00000574867 TMEM82A0PJX8 343 aa14.18□□□□□ -0.14
NUP88-210ENST00000574867 KIAA1324LA8MWY0 1029 aaPredicted RBP14.18□□□□□ -0.14
NUP88-210ENST00000574867 PSPNO60542 156 aa14.18□□□□□ -0.14
NUP88-210ENST00000574867 ECDO95905 644 aaPredicted RBP14.18□□□□□ -0.14
NUP88-210ENST00000574867 MSMBP08118 114 aa14.18□□□□□ -0.14
NUP88-210ENST00000574867 SOX6P35712 828 aa14.18□□□□□ -0.14
NUP88-210ENST00000574867 YLPM1P49750 1951 aaKnown RBP14.18□□□□□ -0.14
NUP88-210ENST00000574867 TRAV24A0A0B4J272 114 aa14.18□□□□□ -0.14
NUP88-210ENST00000574867 DPPA5A6NC42 116 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms