RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 ACKR3P25106 362 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 MAP2K3P46734 347 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 OR10A3P58181 314 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 NANOS3P60323 173 aaKnown RBP8□□□□□ -1.13
NPLOC4-216ENST00000574344 ARF6P62330 175 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 IL13RA1P78552 427 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 IKZF1Q13422 519 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 WDR38Q5JTN6 314 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 CCBE1Q6UXH8 406 aaPredicted RBP8□□□□□ -1.13
NPLOC4-216ENST00000574344 UNQ9370/PRO34162Q6UXP9 181 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 AKAP14Q86UN6 197 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 PDZD9Q8IXQ8 264 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 FAM216BQ8N7L0 139 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 LGALS14Q8TCE9 139 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 H1FXQ92522 213 aaKnown RBP8□□□□□ -1.13
NPLOC4-216ENST00000574344 LHX4Q969G2 390 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 TMEM106AQ96A25 262 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 PHF21AQ96BD5 680 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 ITPKCQ96DU7 683 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 RNF170Q96K19 258 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 UNKLQ9H9P5 680 aaKnown RBP8□□□□□ -1.13
NPLOC4-216ENST00000574344 FRRS1LQ9P0K9 344 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 ZNF391Q9UJN7 358 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 SPATA2Q9UM82 520 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 V9GY05 133 aa8□□□□□ -1.13
NPLOC4-216ENST00000574344 A0A0G2JK05 382 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 ZNF816-ZNF321PA0A0X1KG74 233 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 TMEM269A0A1B0GVZ9 245 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 A0A1B0GW55 424 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 A0A1W2PPK0 400 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 TMEM210A6NLX4 147 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 OR4C45A6NMZ5 311 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 IFITM5A6NNB3 132 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 SRRM5B3KS81 715 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 CLDN34H7C241 214 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 AKR7A2O43488 359 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 NDUFB3O43676 98 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 ECDO95905 644 aaPredicted RBP7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 LHBP01229 141 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 EIF4EP06730 217 aaKnown RBP7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 DUX4L2P0CJ85 424 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 DUX4L3P0CJ86 424 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 DUX4L4P0CJ87 422 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 DUX4L5P0CJ88 424 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 DUX4L6P0CJ89 424 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 DUX4L7P0CJ90 424 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 ATF1P18846 271 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 FSTP19883 344 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 OMGP23515 440 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 SOX2P48431 317 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 GPM6AP51674 278 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 AP3S2P59780 193 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 BPIFB3P59826 476 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 RPS11P62280 158 aaKnown RBP eCLIP7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 MRPS10P82664 201 aaKnown RBP7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 PDCD1Q15116 288 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 TUSC1Q2TAM9 212 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 LRRC10Q5BKY1 277 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 TMEM244Q5VVB8 128 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 DUX4L9Q6RFH8 374 aaPredicted RBP7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 PLET1Q6UQ28 207 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 SHISA2Q6UWI4 295 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 C11orf53Q8IXP5 236 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 CMTM4Q8IZR5 234 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 FGFRL1Q8N441 504 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 NKAIN3Q8N8D7 197 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 DRAXINQ8NBI3 349 aaPredicted RBP7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 OR4M1Q8NGD0 313 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 OR5T2Q8NGG2 359 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 OR13C3Q8NGS6 347 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 TAF15Q92804 592 aaKnown RBP eCLIP7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 SEH1LQ96EE3 360 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 FAM71F1Q96KD3 344 aaPredicted RBP7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 LYZL4Q96KX0 146 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 TBX15Q96SF7 602 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 SDHCQ99643 169 aaPredicted RBP7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 KAAG1Q9UBP8 84 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 DUX4Q9UBX2 424 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 RPUSD1Q9UJJ7 312 aaKnown RBP7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 TBC1D24Q9ULP9 559 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 HHLA2Q9UM44 414 aa7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 AK6Q9Y3D8 172 aaKnown RBP7.99□□□□□ -1.13
NPLOC4-216ENST00000574344 TRBV5-7A0A0A0MS05 114 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 CENPVL3A0A0U1RRI6 287 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 LINC00854A0A1B0GVQ3 168 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 FAM240BA0A1B0GVZ2 78 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 PRR32B1ATL7 298 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 TNFRSF13BO14836 293 aaPredicted RBP7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 LYRM1O43325 122 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 CST4P01036 141 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 SNRPBP14678 240 aaKnown RBP7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 MMP9P14780 707 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 GLRA1P23415 457 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 DCTDP32321 178 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 GABRA2P47869 451 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 RAB11BQ15907 218 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 BAK1Q16611 211 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 HES5Q5TA89 166 aa7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 RSBN1Q5VWQ0 802 aaPredicted RBP7.98□□□□□ -1.13
NPLOC4-216ENST00000574344 PLCXD3Q63HM9 321 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms