RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CRTAPO75718 401 aaPredicted RBP11.46□□□□□ -0.57
RPAIN-209ENST00000571558 APOA1P02647 267 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 EIF4EP06730 217 aaKnown RBP11.46□□□□□ -0.57
RPAIN-209ENST00000571558 MSMBP08118 114 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 MGMTP16455 207 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 ELK1P19419 428 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 SERPINA2P20848 420 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 FGF12P61328 243 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 RPS27AP62979 156 aaKnown RBP11.46□□□□□ -0.57
RPAIN-209ENST00000571558 MRPS11P82912 194 aaKnown RBP11.46□□□□□ -0.57
RPAIN-209ENST00000571558 AWAT1Q58HT5 328 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 UBE2NLQ5JXB2 153 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 LINC00299Q6ZSB3 139 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 Q8IYB0 196 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 BATF2Q8N1L9 274 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 OR51T1Q8NGJ9 327 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 LRRC29Q8WV35 223 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 FAM46BQ96A09 425 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 MRPS24Q96EL2 167 aaKnown RBP11.46□□□□□ -0.57
RPAIN-209ENST00000571558 Q96M66 194 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 WDFY2Q96P53 400 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 TM2D1Q9BX74 207 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 LPAR5Q9H1C0 372 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 BANF2Q9H503 90 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 ELL3Q9HB65 397 aaPredicted RBP11.46□□□□□ -0.57
RPAIN-209ENST00000571558 HMG20AQ9NP66 347 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 RNF7Q9UBF6 113 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 IL36RNQ9UBH0 155 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 PEX16Q9Y5Y5 336 aa11.46□□□□□ -0.57
RPAIN-209ENST00000571558 A0A0A6YYD4 124 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 IGHV1-69-2A0A0G2JMI3 117 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 hCG_1807616A0A1W2PRN6 198 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 IFNL4K9M1U5 179 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 RGS5O15539 181 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 RP2O75695 350 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 HTR3BO95264 441 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 MPIG6BO95866 241 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 CSTBP04080 98 aaKnown RBP11.45□□□□□ -0.58
RPAIN-209ENST00000571558 GTF2F2P13984 249 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 TNFSF8P32971 234 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 RBM11P57052 281 aaKnown RBP11.45□□□□□ -0.58
RPAIN-209ENST00000571558 DEFA6Q01524 100 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 FOXL1Q12952 345 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 CMTM4Q8IZR5 234 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 FAM58AQ8N1B3 248 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 OSR2Q8N2R0 312 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 FAM89BQ8N5H3 189 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 YIPF5Q969M3 257 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 SUCNR1Q9BXA5 334 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 TMEM59Q9BXS4 323 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 WDR13Q9H1Z4 485 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 PCDHB16Q9NRJ7 776 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 TREM2Q9NZC2 230 aa11.45□□□□□ -0.58
RPAIN-209ENST00000571558 TRAV20A0A0B4J274 112 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 FOXI3A8MTJ6 420 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-209ENST00000571558 TMEM178BH3BS89 294 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 NXPH2O95156 264 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 EPHA1P21709 976 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 COL8A2P25067 703 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 PIGYQ3MUY2 71 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 CCDC190Q86UF4 302 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 LRRC28Q86X40 367 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-209ENST00000571558 OR11L1Q8NGX0 322 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 RAB40AQ8WXH6 277 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 SEH1LQ96EE3 360 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 NICN1Q9BSH3 213 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 SELENOIQ9C0D9 397 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 TMEM106BQ9NUM4 274 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 RASL12Q9NYN1 266 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 TANC2Q9HCD6 1990 aa11.44□□□□□ -0.58
RPAIN-209ENST00000571558 LYNX1G3V0Z9 82 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 CYB5R3P00387 301 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-209ENST00000571558 LYNX1P0DP58 116 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 PRKACAP17612 351 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 GLRA1P23415 457 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 TMEM33P57088 247 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 ZNF146Q15072 292 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 ACP7Q6ZNF0 438 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 FAM90A1Q86YD7 464 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 RDH5Q92781 318 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 EMG1Q92979 244 aaKnown RBP11.43□□□□□ -0.58
RPAIN-209ENST00000571558 SOSTQ9BQB4 213 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 ZNF581Q9P0T4 197 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 ST3GAL6Q9Y274 331 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 NPTNQ9Y639 398 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 LRRC30A6NM36 301 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 RAB27BO00194 218 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 GEMIN2O14893 280 aaKnown RBP11.43□□□□□ -0.58
RPAIN-209ENST00000571558 CDK2P24941 298 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 CD80P33681 288 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 ETV6P41212 452 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 GPR6P46095 362 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-209ENST00000571558 LSAMPQ13449 338 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 MOGAT2Q3SYC2 334 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 SPIN3Q5JUX0 258 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 FAM201AQ5SY85 155 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 TEX36Q5VZQ5 186 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 SIGIRRQ6IA17 410 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 CNIH2Q6PI25 160 aa11.43□□□□□ -0.58
RPAIN-209ENST00000571558 METAP1DQ6UB28 335 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms