RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ZNF561Q8N587 486 aa5.74□□□□□ -1.49
SMG6-209ENST00000571442 ASCC1Q8N9N2 400 aaKnown RBP5.74□□□□□ -1.49
SMG6-209ENST00000571442 ZSCAN4Q8NAM6 433 aaPredicted RBP5.74□□□□□ -1.49
SMG6-209ENST00000571442 Q8NFD4 153 aa5.74□□□□□ -1.49
SMG6-209ENST00000571442 TNFRSF14Q92956 283 aa5.74□□□□□ -1.49
SMG6-209ENST00000571442 COQ2Q96H96 371 aa5.74□□□□□ -1.49
SMG6-209ENST00000571442 MED30Q96HR3 178 aa5.74□□□□□ -1.49
SMG6-209ENST00000571442 WDFY2Q96P53 400 aa5.74□□□□□ -1.49
SMG6-209ENST00000571442 NR1H4Q96RI1 486 aaPredicted RBP5.74□□□□□ -1.49
SMG6-209ENST00000571442 GPER1Q99527 375 aa5.74□□□□□ -1.49
SMG6-209ENST00000571442 YTHDF1Q9BYJ9 559 aaKnown RBP5.74□□□□□ -1.49
SMG6-209ENST00000571442 RNF167Q9H6Y7 350 aa5.74□□□□□ -1.49
SMG6-209ENST00000571442 SIRT7Q9NRC8 400 aa5.74□□□□□ -1.49
SMG6-209ENST00000571442 LPAR3Q9UBY5 353 aa5.74□□□□□ -1.49
SMG6-209ENST00000571442 ING4Q9UNL4 249 aa5.74□□□□□ -1.49
SMG6-209ENST00000571442 NBEAL1Q6ZS30 2694 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 A0A0G2JK05 382 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 CENPVL3A0A0U1RRI6 287 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 RNASEK-C17orf49H0YIS7 233 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 SLC33A1O00400 549 aaPredicted RBP5.73□□□□□ -1.49
SMG6-209ENST00000571442 MRPS14O60783 128 aaKnown RBP5.73□□□□□ -1.49
SMG6-209ENST00000571442 CHRM2P08172 466 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 SMIM18P0DKX4 95 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 SRMP19623 302 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 SERPINA2P20848 420 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 EPHA1P21709 976 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 LMO1P25800 156 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 PSMB9P28065 219 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 GABRA5P31644 462 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 CAPZA1P52907 286 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 OR10A3P58181 314 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 SCN1BQ07699 218 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 PLA2G7Q13093 441 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 EDDM3AQ14507 147 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 NEDD8Q15843 81 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 SLC22A6Q4U2R8 563 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 HSD17B12Q53GQ0 312 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 UTF1Q5T230 341 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 CD276Q5ZPR3 534 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 ELP2Q6IA86 826 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 BRICD5Q6PL45 260 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 CD200R1LQ6Q8B3 271 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 GLIPR1L1Q6UWM5 242 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 BTNL3Q6UXE8 466 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 BAIAP2L2Q6UXY1 529 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 VMO1Q7Z5L0 202 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 NR2C2APQ86WQ0 139 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 Q8IYB0 196 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 FAM185AQ8N0U4 392 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 JAGN1Q8N5M9 183 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 MS4A15Q8N5U1 240 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 TMEM104Q8NE00 496 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 OR51T1Q8NGJ9 327 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 PLPPR1Q8TBJ4 325 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 SLC25A28Q96A46 364 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 SNX22Q96L94 193 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 SLC6A7Q99884 636 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 PCGF1Q9BSM1 259 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 MRI1Q9BV20 369 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 PPA2Q9H2U2 334 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 BANF2Q9H503 90 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 SEBOXQ9HB31 216 aaPredicted RBP5.73□□□□□ -1.49
SMG6-209ENST00000571442 ESM1Q9NQ30 184 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 NDUFB11Q9NX14 153 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 IL36GQ9NZH8 169 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 ONECUT1Q9UBC0 465 aa5.73□□□□□ -1.49
SMG6-209ENST00000571442 MRPS28Q9Y2Q9 187 aaKnown RBP5.73□□□□□ -1.49
SMG6-209ENST00000571442 AK6Q9Y3D8 172 aaKnown RBP5.73□□□□□ -1.49
SMG6-209ENST00000571442 A0A0A6YYD4 124 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 TRAV39A0A0B4J263 110 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 TRDV1A0A1B0GX56 115 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 A0A1W2PRD5 423 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 A0A1W2PRF3 423 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 A0A1W2PRM7 423 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 SMIM30A4D0T7 59 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 TRIM64CA6NLI5 447 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 HSPB6O14558 160 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 GEMIN2O14893 280 aaKnown RBP5.72□□□□□ -1.49
SMG6-209ENST00000571442 MAGEB3O15480 346 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 MMP23AO75900 390 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 TOX4O94842 621 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 VENTXO95231 258 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 ECDO95905 644 aaPredicted RBP5.72□□□□□ -1.49
SMG6-209ENST00000571442 CYB5AP00167 134 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 LIPFP07098 398 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 ZNF44P15621 663 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 HNF1AP20823 631 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 GABRR1P24046 479 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 PAX6P26367 422 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 CALRP27797 417 aaKnown RBP5.72□□□□□ -1.49
SMG6-209ENST00000571442 TGFBR1P36897 503 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 GDNFP39905 211 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 GLIPR1P48060 266 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 MTNR1BP49286 362 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 CLDN12P56749 244 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 EDDM3BP56851 147 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 RBM11P57052 281 aaKnown RBP5.72□□□□□ -1.49
SMG6-209ENST00000571442 QRFPP83859 136 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 AESQ08117 197 aa5.72□□□□□ -1.49
SMG6-209ENST00000571442 UNC119Q13432 240 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms