RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 GAGE2DQ9UEU5 116 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 Q9UFV3 132 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TESQ9UGI8 421 aaKnown RBP3.07□□□□□ -1.92
SMG6-208ENST00000570874 DUSP13Q9UII6 198 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 GNG8Q9UK08 70 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 VPREB3Q9UKI3 123 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 FZR1Q9UM11 496 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 ZDBF2Q9HCK1 2354 aa3.07□□□□□ -1.92
SMG6-208ENST00000570874 TRBV4-1A0A0J9YWV2 114 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 SLC22A23A1A5C7 686 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 C17orf51A8MQB3 221 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 C17orf105B2RV13 164 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ZNF878C9JN71 531 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 C15orf65H3BRN8 121 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 H7C2Y5 167 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 TNFRSF11BO00300 401 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ENSAO43768 121 aaKnown RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 CDC40O60508 579 aaKnown RBP eCLIP3.06□□□□□ -1.92
SMG6-208ENST00000570874 EIF4E2O60573 245 aaKnown RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 ALOX12BO75342 701 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 TRAPPC6AO75865 159 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 VENTXO95231 258 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 GPR75O95800 540 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 HAND1O96004 215 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 IGKV1D-16P01601 117 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 IGHG3P01860 377 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 IGF1P05019 195 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 F13BP05160 661 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 SERPINA7P05543 415 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 HOXD4P09016 255 aaPredicted RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 GIPP09681 153 aaPredicted RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 MGMTP16455 207 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 HOXB4P17483 251 aaPredicted RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 SRD5A1P18405 259 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 FGF9P31371 208 aaPredicted RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 FMO3P31513 532 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 S100A11P31949 105 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 CCKARP32238 428 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 CD200P41217 278 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 TSFMP43897 325 aaKnown RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 MAP2K4P45985 399 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 GZMKP49863 264 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 EMDP50402 254 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 CRISP1P54107 249 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 TPTEP56180 551 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 CLDN12P56749 244 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 CKS1BP61024 79 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 RAP1AP62834 184 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 GNG3P63215 75 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 SLC35A2P78381 396 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 HSF1Q00613 529 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 EMX1Q04741 257 aaPredicted RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 MFGE8Q08431 387 aaPredicted RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 CD47Q08722 323 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 UBE2V1Q13404 147 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 CACNA1CQ13936 2221 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 FAM53BQ14153 422 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 EDDM3AQ14507 147 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 NEDD8Q15843 81 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ZNF74Q16587 644 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 TBC1D28Q2M2D7 210 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ZNF404Q494X3 552 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ZNF585BQ52M93 769 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 SYT14P1Q58G82 188 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 TMEM97Q5BJF2 176 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 DCAF10Q5QP82 559 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ATAD3CQ5T2N8 411 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 KDM4DQ6B0I6 523 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 TYW3Q6IPR3 259 aaKnown RBP3.06□□□□□ -1.92
SMG6-208ENST00000570874 LCN10Q6JVE6 187 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 TEPPQ6URK8 271 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 TMEM64Q6YI46 380 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 FRRS1Q6ZNA5 592 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 SHISA6Q6ZSJ9 500 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 MBOAT2Q6ZWT7 520 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ASCL5Q7RTU5 278 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 MDGA2Q7Z553 956 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 RAB43Q86YS6 212 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 LGI4Q8N135 537 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 CLIP4Q8N3C7 705 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 ARRDC1Q8N5I2 433 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 BPIFB6Q8NFQ5 453 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR2Z1Q8NG97 314 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR10G2Q8NGC3 310 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR4N2Q8NGD1 307 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR4D9Q8NGE8 314 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR52R1Q8NGF1 315 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR6T1Q8NGN1 323 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR5M3Q8NGP4 307 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR5H6Q8NGV6 325 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR13G1Q8NGZ3 307 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR1P1Q8NH06 330 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR51Q1Q8NH59 317 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 OR4S2Q8NH73 311 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 CNIH3Q8TBE1 160 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 Q8WTZ3 238 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 RAB3CQ96E17 227 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 MS4A4EQ96PG1 132 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 UHRF2Q96PU4 802 aa3.06□□□□□ -1.92
SMG6-208ENST00000570874 RBP7Q96R05 134 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms