RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 FXYD6Q9H0Q3 95 aa6.26□□□□□ -1.41
HERPUD1-209ENST00000564678 PPA2Q9H2U2 334 aa6.26□□□□□ -1.41
HERPUD1-209ENST00000564678 C5orf66Q9H5L9 145 aa6.26□□□□□ -1.41
HERPUD1-209ENST00000564678 CALHM2Q9HA72 323 aa6.26□□□□□ -1.41
HERPUD1-209ENST00000564678 OSGIN2Q9Y236 505 aa6.26□□□□□ -1.41
HERPUD1-209ENST00000564678 U3KQE9 123 aa6.26□□□□□ -1.41
HERPUD1-209ENST00000564678 IGKV1-27A0A075B6S5 117 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 LOC100509620A0A075B734 347 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 TRAV14DV4A0A0A6YYC5 116 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 FAM230AA0A1W2PPH8 454 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 ZNF785A8K8V0 405 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 SFT2D2O95562 160 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 AKR1C4P17516 323 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 RFC3P40938 356 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 MFAP4P55083 255 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 FHL3Q13643 280 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 KIR3DS1Q14943 382 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 CHRFAM7AQ494W8 412 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 DMRTC1Q5HYR2 192 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 AADACL3Q5VUY0 350 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 GSG1LQ6UXU4 331 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 RTN4RL2Q86UN3 420 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 OSR2Q8N2R0 312 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 ADAD2Q8NCV1 583 aaKnown RBP6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 ANGPTL6Q8NI99 470 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 SCARB1Q8WTV0 552 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 APOBEC3DQ96AK3 386 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 NMES1Q9C002 83 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 FN3KRPQ9HA64 309 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 RAB18Q9NP72 206 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 SLC35D1Q9NTN3 355 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 MED9Q9NWA0 146 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 FREM1Q5H8C1 2179 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 FAM90A10PA6NDY2 464 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 FAM90A8PA6NJQ4 464 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 FAM90A13PP0C7W8 464 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 FAM90A24PP0C7X0 464 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 GABRR1P24046 479 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 PLP2Q04941 152 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 PLEKHN1Q494U1 663 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 THOC7Q6I9Y2 204 aaKnown RBP6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 SIGIRRQ6IA17 410 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 MOB3CQ70IA8 216 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 C6orf201Q7Z4U5 140 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 SAXO1Q8IYX7 474 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 COQ8AQ8NI60 647 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 FAM216AQ8WUB2 273 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 PPP1R1CQ8WVI7 109 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 PIGCQ92535 297 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 WDYHV1Q96HA8 205 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 RTBDNQ9BSG5 229 aaPredicted RBP6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 ZDHHC11Q9H8X9 412 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 GLRX2Q9NS18 164 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 EHFQ9NZC4 300 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 TNFSF18Q9UNG2 199 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 ZNF175Q9Y473 711 aa6.25□□□□□ -1.41
HERPUD1-209ENST00000564678 ZNF407Q9C0G0 2248 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 TRGV5A0A0B4J1U4 118 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 ARGFXA6NJG6 315 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 SS18L1O75177 396 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 CST4P01036 141 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 IGHV3-9P01782 118 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 RRASP10301 218 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 CHATP28329 748 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 MPGP29372 298 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 AP2S1P53680 142 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 ARG2P78540 354 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 TAF9Q16594 264 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 PLCXD3Q63HM9 321 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 DHRS11Q6UWP2 260 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 ACOT7LQ6ZUV0 252 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 TMEM200AQ86VY9 491 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 KCNRGQ8N5I3 272 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 OR13G1Q8NGZ3 307 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 OR51F2Q8NH61 342 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 THAP6Q8TBB0 222 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 TMEM230Q96A57 120 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 CMSS1Q9BQ75 279 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 ANXA10Q9UJ72 324 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 ANGPTL7O43827 346 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 CRHP06850 196 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 FAM87AP0C7U9 286 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 PSMB6P28072 239 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 TNFSF10P50591 281 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 P2RX3P56373 397 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 ARPC4P59998 168 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 SRSF7Q16629 238 aaKnown RBP eCLIP6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 RSPO4Q2I0M5 234 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 CEACAM21Q3KPI0 293 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 ELP2Q6IA86 826 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 TMEM211Q6ICI0 200 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 CLEC18BQ6UXF7 455 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 C1orf229Q6ZS94 237 aaPredicted RBP6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 KCTD9Q7L273 389 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 CASTOR1Q8WTX7 329 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 SEC22AQ96IW7 307 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 POM121L2Q96KW2 1035 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 CTDSP1Q9GZU7 261 aa6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 LIN7CQ9NUP9 197 aaKnown RBP6.24□□□□□ -1.41
HERPUD1-209ENST00000564678 ZNF701Q9NV72 531 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms