RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 PCDHB16Q9NRJ7 776 aa12.9□□□□□ -0.34
CDH11-209ENST00000564317 FBLN5Q9UBX5 448 aa12.9□□□□□ -0.34
CDH11-209ENST00000564317 TEX15Q9BXT5 2789 aa12.9□□□□□ -0.34
CDH11-209ENST00000564317 ABCA2Q9BZC7 2435 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 KIAA1324LA8MWY0 1029 aaPredicted RBP12.89□□□□□ -0.35
CDH11-209ENST00000564317 DVL1O14640 695 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 SH2D1BO14796 132 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 PHF1O43189 567 aaPredicted RBP12.89□□□□□ -0.35
CDH11-209ENST00000564317 PSPNO60542 156 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 CHRM2P08172 466 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 IGHV4-31P0DP07 118 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 ZNF44P15621 663 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 ZFP36P26651 326 aaKnown RBP12.89□□□□□ -0.35
CDH11-209ENST00000564317 RPS27AP62979 156 aaKnown RBP12.89□□□□□ -0.35
CDH11-209ENST00000564317 SCN1BQ07699 218 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 TMEM249Q2WGJ8 235 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 WDR25Q64LD2 544 aaPredicted RBP12.89□□□□□ -0.35
CDH11-209ENST00000564317 NLRC3Q7RTR2 1065 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 TMEM185AQ8NFB2 350 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 OR5H6Q8NGV6 325 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 MRPS24Q96EL2 167 aaKnown RBP12.89□□□□□ -0.35
CDH11-209ENST00000564317 NICN1Q9BSH3 213 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 TM2D1Q9BX74 207 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 TMEM59Q9BXS4 323 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 LPAR5Q9H1C0 372 aa12.89□□□□□ -0.35
CDH11-209ENST00000564317 RSL24D1Q9UHA3 163 aaKnown RBP12.89□□□□□ -0.35
CDH11-209ENST00000564317 TRAV24A0A0B4J272 114 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 SMIM31A0A1B0GVY4 71 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 SLC33A1O00400 549 aaPredicted RBP12.88□□□□□ -0.35
CDH11-209ENST00000564317 DEGS1O15121 323 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 NDUFB3O43676 98 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 GABRR1P24046 479 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 LMO1P25800 156 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 OR3A1P47881 315 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 SIGIRRQ6IA17 410 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 C17orf107Q6ZR85 190 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 RTN4RL2Q86UN3 420 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 ZNF561Q8N587 486 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 ASCC1Q8N9N2 400 aaKnown RBP12.88□□□□□ -0.35
CDH11-209ENST00000564317 OR4S1Q8NGB4 309 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 DYNC2LI1Q8TCX1 351 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 MED30Q96HR3 178 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 SSBP3Q9BWW4 388 aaPredicted RBP12.88□□□□□ -0.35
CDH11-209ENST00000564317 CHST6Q9GZX3 395 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 SHARPINQ9H0F6 387 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 LPAR2Q9HBW0 351 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 SLC25A10Q9UBX3 287 aaPredicted RBP12.88□□□□□ -0.35
CDH11-209ENST00000564317 GLS2Q9UI32 602 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 CREBBPQ92793 2442 aa12.88□□□□□ -0.35
CDH11-209ENST00000564317 A8MXK9 166 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 K7N7A8 449 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 HSPB6O14558 160 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 OR7C1O76099 320 aaPredicted RBP12.87□□□□□ -0.35
CDH11-209ENST00000564317 TK1P04183 234 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 HEXAP06865 529 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 CPT2P23786 658 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 GNB2P62879 340 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 LCN2P80188 198 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 KRTAP1-1Q07627 177 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 MPV17LQ2QL34 196 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 ESCO2Q56NI9 601 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 LINC00596Q86U02 117 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 CROCCP3Q8IVE0 287 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 CHST4Q8NCG5 386 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 ST8SIA4Q92187 359 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 SLC25A38Q96DW6 304 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 SNX22Q96L94 193 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 TMUB1Q9BVT8 246 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 IFT22Q9H7X7 185 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 RCC2Q9P258 522 aaKnown RBP12.87□□□□□ -0.35
CDH11-209ENST00000564317 CLN8Q9UBY8 286 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 RAB22AQ9UL26 194 aa12.87□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A10PA6NDY2 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A18PA6NE21 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A16PA6NEW6 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A20PA6NIJ5 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A8PA6NJQ4 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A7PA6NKC0 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FOXI3A8MTJ6 420 aaPredicted RBP12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A22PA8MWA6 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A12PA8MX19 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A5PA8MXJ8 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A23PA8MXZ1 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 C22orf46C9J442 243 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 ZNF701M0R085 212 aaPredicted RBP12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A15PP0C7V4 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A13PP0C7W8 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A14PP0C7W9 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM90A24PP0C7X0 464 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 RAB6AP20340 208 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 RANBP1P43487 201 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 RORCP51449 518 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 LRRC10Q5BKY1 277 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 BRICD5Q6PL45 260 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM89BQ8N5H3 189 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 SUMF2Q8NBJ7 301 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 MSI2Q96DH6 328 aaKnown RBP12.86□□□□□ -0.35
CDH11-209ENST00000564317 FAM234AQ9H0X4 552 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 PPA2Q9H2U2 334 aa12.86□□□□□ -0.35
CDH11-209ENST00000564317 ABRACLQ9P1F3 81 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms