RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 DYNC1I2Q13409 638 aaKnown RBP8.31□□□□□ -1.08
CLK3-205ENST00000561673 FAM189A2Q15884 450 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 SPIN3Q5JUX0 258 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 CCBE1Q6UXH8 406 aaPredicted RBP8.31□□□□□ -1.08
CLK3-205ENST00000561673 SYS1Q8N2H4 156 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 PQLC1Q8N2U9 271 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 OR52I1Q8NGK6 324 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 OR5D18Q8NGL1 313 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 OR4C13Q8NGP0 309 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 OR13C9Q8NGT0 318 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 FAM110DQ8TAY7 271 aaPredicted RBP8.31□□□□□ -1.08
CLK3-205ENST00000561673 MYCBPQ99417 103 aaPredicted RBP8.31□□□□□ -1.08
CLK3-205ENST00000561673 PDCD1LG2Q9BQ51 273 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 INPP5EQ9NRR6 644 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 MRPS18AQ9NVS2 196 aaKnown RBP8.31□□□□□ -1.08
CLK3-205ENST00000561673 ERVK13-1Q9NX77 482 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 PGPEP1Q9NXJ5 209 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 FOXJ3Q9UPW0 622 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 TBL2Q9Y4P3 447 aaKnown RBP8.31□□□□□ -1.08
CLK3-205ENST00000561673 SESN1Q9Y6P5 492 aa8.31□□□□□ -1.08
CLK3-205ENST00000561673 IGHV2-26A0A0B4J1V2 119 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 A0A0G2JK05 382 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 A6NDX4 124 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 TMEM212A6NML5 194 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 EBAG9O00559 213 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 MMP23AO75900 390 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 ALX3O95076 343 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 BAG2O95816 211 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 TSPAN15O95858 294 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 JUNBP17275 347 aaPredicted RBP8.3□□□□□ -1.08
CLK3-205ENST00000561673 LMO1P25800 156 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 P2RX3P56373 397 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 SCN1BQ07699 218 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 HERPUD1Q15011 391 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 KISS1Q15726 138 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 HIST2H2BDQ6DRA6 164 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 TMEM219Q86XT9 240 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 SERPINA12Q8IW75 414 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 SAXO1Q8IYX7 474 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 PARP16Q8N5Y8 322 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 OR5D14Q8NGL3 314 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 OR5AK2Q8NH90 309 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 OR2T6Q8NHC8 308 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 APH1BQ8WW43 257 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 FOXRED1Q96CU9 486 aaPredicted RBP8.3□□□□□ -1.08
CLK3-205ENST00000561673 NKX3-1Q99801 234 aaPredicted RBP8.3□□□□□ -1.08
CLK3-205ENST00000561673 CDCA4Q9BXL8 241 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 NPFFR1Q9GZQ6 430 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 TMEM133Q9H2Q1 129 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 RANBP3Q9H6Z4 567 aaPredicted RBP8.3□□□□□ -1.08
CLK3-205ENST00000561673 NEK6Q9HC98 313 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 EXOSC4Q9NPD3 245 aaKnown RBP8.3□□□□□ -1.08
CLK3-205ENST00000561673 UBE2J1Q9Y385 318 aaPredicted RBP8.3□□□□□ -1.08
CLK3-205ENST00000561673 RPL36Q9Y3U8 105 aaKnown RBP8.3□□□□□ -1.08
CLK3-205ENST00000561673 HILPDAQ9Y5L2 63 aa8.3□□□□□ -1.08
CLK3-205ENST00000561673 NOTCH1P46531 2555 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 TGP01266 2768 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 SULT1B1O43704 296 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 WBP4O75554 376 aaKnown RBP8.29□□□□□ -1.08
CLK3-205ENST00000561673 HCKP08631 526 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 RPSAP08865 295 aaKnown RBP8.29□□□□□ -1.08
CLK3-205ENST00000561673 TMEM225BP0DP42 221 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 GLIPR1P48060 266 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 DYNLT3P51808 116 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 GTF2A1P52655 376 aaPredicted RBP8.29□□□□□ -1.08
CLK3-205ENST00000561673 GBX2P52951 348 aaPredicted RBP8.29□□□□□ -1.08
CLK3-205ENST00000561673 ZP1P60852 638 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 AESQ08117 197 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 MRPL28Q13084 256 aaKnown RBP8.29□□□□□ -1.08
CLK3-205ENST00000561673 HABP2Q14520 560 aaPredicted RBP8.29□□□□□ -1.08
CLK3-205ENST00000561673 SMN1Q16637 294 aaKnown RBP8.29□□□□□ -1.08
CLK3-205ENST00000561673 C2orf68Q2NKX9 166 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 PDLIM3Q53GG5 364 aaPredicted RBP8.29□□□□□ -1.08
CLK3-205ENST00000561673 KLHL22Q53GT1 634 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 MINOS1Q5TGZ0 78 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 Q6P435 159 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 C11orf88Q6PI97 169 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 BAIAP2L2Q6UXY1 529 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 Q6ZTK2 550 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 TRAPPC6BQ86SZ2 158 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 KLHDC1Q8N7A1 406 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 C11orf44Q8N8P7 122 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 RPS4Y2Q8TD47 263 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 CFHR4Q92496 578 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 CORO2AQ92828 525 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 CLEC7AQ9BXN2 247 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 COMMD4Q9H0A8 199 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 ZNF702PQ9H963 129 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 RHOFQ9HBH0 211 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 ABCB10Q9NRK6 738 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 DHDHQ9UQ10 334 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 TCF19Q9Y242 345 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 MINOS1-NBL1R4GNA1 71 aa8.29□□□□□ -1.08
CLK3-205ENST00000561673 TRGV10A0A0A0MS01 117 aa8.28□□□□□ -1.08
CLK3-205ENST00000561673 SLC33A1O00400 549 aaPredicted RBP8.28□□□□□ -1.08
CLK3-205ENST00000561673 DEGS1O15121 323 aa8.28□□□□□ -1.08
CLK3-205ENST00000561673 CSF1P09603 554 aa8.28□□□□□ -1.08
CLK3-205ENST00000561673 CCDC159P0C7I6 412 aa8.28□□□□□ -1.08
CLK3-205ENST00000561673 LIMS3P0CW19 117 aa8.28□□□□□ -1.08
CLK3-205ENST00000561673 LIMS4P0CW20 117 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms