RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-208	ENST00000561271	TCF7L1	Q9HCS4	588 aa		13.93	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	EXOSC4	Q9NPD3	245 aa	Known RBP	13.93	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	DHDH	Q9UQ10	334 aa		13.93	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	SIGLEC9	Q9Y336	463 aa		13.93	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	MEGF11	A6BM72	1044 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	FAM90A8P	A6NJQ4	464 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271		M0QZ24	198 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	MGST3	O14880	152 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	TIMM23	O14925	209 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	SULT1B1	O43704	296 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	GABRA5	P31644	462 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	GBX2	P52951	348 aa	Predicted RBP	13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	P2RX3	P56373	397 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	ZP1	P60852	638 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	MRPL28	Q13084	256 aa	Known RBP	13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	DYNC1I2	Q13409	638 aa	Known RBP	13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	IL18R1	Q13478	541 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	LRRC36	Q1X8D7	754 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	KLHL22	Q53GT1	634 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	XAF1	Q6GPH4	301 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	ASPHD2	Q6ICH7	369 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	TRAPPC6B	Q86SZ2	158 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	OR4C13	Q8NGP0	309 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	CNIH3	Q8TBE1	160 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	PIFO	Q8TCI5	191 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	RDH12	Q96NR8	316 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	MRPS18A	Q9NVS2	196 aa	Known RBP	13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	GLS2	Q9UI32	602 aa		13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	TBL2	Q9Y4P3	447 aa	Known RBP	13.92	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	SOX2	P48431	317 aa		13.91	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	ETV1	P50549	477 aa		13.91	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	FAM189A2	Q15884	450 aa		13.91	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	SSX2	Q16385	188 aa		13.91	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	ZNF691	Q5VV52	312 aa		13.91	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	PARP16	Q8N5Y8	322 aa		13.91	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	OR11H6	Q8NGC7	330 aa		13.91	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	OR51A2	Q8NGJ7	313 aa		13.91	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	FGF20	Q9NP95	211 aa	Predicted RBP	13.91	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	SESN1	Q9Y6P5	492 aa		13.91	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	IGHV2-26	A0A0B4J1V2	119 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	SH2D1B	O14796	132 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	KCNAB3	O43448	404 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	MMP23A	O75900	390 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	TSPAN15	O95858	294 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	TMEM225B	P0DP42	221 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	ZNF44	P15621	663 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	JUNB	P17275	347 aa	Predicted RBP	13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	RAB13	P51153	203 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	SCN1B	Q07699	218 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	KISS1	Q15726	138 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	PRAMEF5	Q5TYX0	476 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	OR2G6	Q5TZ20	316 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	SERPINA12	Q8IW75	414 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	SAXO1	Q8IYX7	474 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	OR5D14	Q8NGL3	314 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	CYGB	Q8WWM9	190 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	NKX3-1	Q99801	234 aa	Predicted RBP	13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	JAM3	Q9BX67	310 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	RAB18	Q9NP72	206 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	ING3	Q9NXR8	418 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	TAS2R4	Q9NYW5	299 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	FBLN5	Q9UBX5	448 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	PCDHGB5	Q9Y5G0	923 aa		13.9	□□□□□ -0.18
CDC42BPB-208	ENST00000561271	FAM172BP	A6NC97	362 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	VGLL3	A8MV65	326 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	ERP29	P30040	261 aa	Known RBP	13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	GLIPR1	P48060	266 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	EFNB2	P52799	333 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	AES	Q08117	197 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	ATXN7L3	Q14CW9	347 aa	Predicted RBP	13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	CDK5R1	Q15078	307 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	HIST2H2BD	Q6DRA6	164 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271		Q6P435	159 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	BAIAP2L2	Q6UXY1	529 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	LIAT1	Q6ZQX7	453 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	TMEM219	Q86XT9	240 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	CLEC7A	Q9BXN2	247 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	NPFFR1	Q9GZQ6	430 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	TMEM133	Q9H2Q1	129 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	MMP27	Q9H306	513 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	RANBP3	Q9H6Z4	567 aa	Predicted RBP	13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	ABCB10	Q9NRK6	738 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	TCF19	Q9Y242	345 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	HILPDA	Q9Y5L2	63 aa		13.89	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	TRGV10	A0A0A0MS01	117 aa		13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	SLC33A1	O00400	549 aa	Predicted RBP	13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	GABRP	O00591	440 aa		13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	HSPB6	O14558	160 aa		13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	ALX3	O95076	343 aa		13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	RPSA	P08865	295 aa	Known RBP	13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	RAB3A	P20336	220 aa		13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	RCN1	Q15293	331 aa		13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	OR2T6	Q8NHC8	308 aa		13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	NDNF	Q8TB73	568 aa		13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	RPS4Y2	Q8TD47	263 aa		13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	HAVCR2	Q8TDQ0	301 aa		13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	MALSU1	Q96EH3	234 aa		13.88	□□□□□ -0.19
CDC42BPB-208	ENST00000561271	COQ2	Q96H96	371 aa		13.88	□□□□□ -0.19

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