RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 RPL36Q9Y3U8 105 aaKnown RBP16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 MEGF11A6BM72 1044 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 TMEM212A6NML5 194 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 E9PI62 339 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 SIRPB1O00241 398 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 SH2D1BO14796 132 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 CHST1O43916 411 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 ZFPL1O95159 310 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 CCDC159P0C7I6 412 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 LMO1P25800 156 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 P2RX3P56373 397 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 KLHL22Q53GT1 634 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 LDLRAD2Q5SZI1 272 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 C11orf88Q6PI97 169 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 SERPINA12Q8IW75 414 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 OR5D18Q8NGL1 313 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 OR5D14Q8NGL3 314 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 APH1BQ8WW43 257 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 COMMD4Q9H0A8 199 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 EXOSC4Q9NPD3 245 aaKnown RBP16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 SESN1Q9Y6P5 492 aa16.54■□□□□ 0.24
CHRNA3-207ENST00000559941 OR2H2O95918 312 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 GBX2P52951 348 aaPredicted RBP16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 DYNC1I2Q13409 638 aaKnown RBP16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 FAM189A2Q15884 450 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 SSX2Q16385 188 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 LPCAT4Q643R3 524 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 PARP16Q8N5Y8 322 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 DTX3Q8N9I9 347 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 OR5AK2Q8NH90 309 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 HAVCR2Q8TDQ0 301 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 PDCD1LG2Q9BQ51 273 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 CDCA4Q9BXL8 241 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 NPFFR1Q9GZQ6 430 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 TCF19Q9Y242 345 aa16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 UBE2J1Q9Y385 318 aaPredicted RBP16.53■□□□□ 0.24
CHRNA3-207ENST00000559941 SULT1B1O43704 296 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 RAB13P51153 203 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 DEFA6Q01524 100 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 HERPUD1Q15011 391 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 PLA1AQ53H76 456 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 MINOS1Q5TGZ0 78 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 OR2T6Q8NHC8 308 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 RDH12Q96NR8 316 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 TMEM133Q9H2Q1 129 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 FGF20Q9NP95 211 aaPredicted RBP16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 ABCB10Q9NRK6 738 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 PCDHGB5Q9Y5G0 923 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 MINOS1-NBL1R4GNA1 71 aa16.52■□□□□ 0.24
CHRNA3-207ENST00000559941 IGHV2-26A0A0B4J1V2 119 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 BAG2O95816 211 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 LIMS3P0CW19 117 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 LIMS4P0CW20 117 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 DYNLT3P51808 116 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 ZP1P60852 638 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 KISS1Q15726 138 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 Q6P435 159 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 CCBE1Q6UXH8 406 aaPredicted RBP16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 ZNF555Q8NEP9 628 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 RPS4Y2Q8TD47 263 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 CORO2AQ92828 525 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 JAM3Q9BX67 310 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 SMPD3Q9NY59 655 aaPredicted RBP16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 DHDHQ9UQ10 334 aa16.51■□□□□ 0.23
CHRNA3-207ENST00000559941 FUOMA2VDF0 154 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 A6NDX4 124 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 WBP4O75554 376 aaKnown RBP16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 MMP23AO75900 390 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 TSPAN15O95858 294 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 CSN2P05814 226 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 HCKP08631 526 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 TMEM225BP0DP42 221 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 ZNF44P15621 663 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 C2orf68Q2NKX9 166 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 Q6ZTK2 550 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 TRAPPC6BQ86SZ2 158 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 TSEN15Q8WW01 171 aaKnown RBP16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 NKX3-1Q99801 234 aaPredicted RBP16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 CLEC7AQ9BXN2 247 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 PITPNC1Q9UKF7 332 aa16.5■□□□□ 0.23
CHRNA3-207ENST00000559941 TRGV10A0A0A0MS01 117 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 A0A0G2JK05 382 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 GTF2A1P52655 376 aaPredicted RBP16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 AESQ08117 197 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 IL18R1Q13478 541 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 SMN1Q16637 294 aaKnown RBP16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 ZSCAN26Q16670 478 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 ZNF691Q5VV52 312 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 HEPN1Q6WQI6 88 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 CHST4Q8NCG5 386 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 NDNFQ8TB73 568 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 CFHR4Q92496 578 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 GAL3ST2Q9H3Q3 398 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 TAS2R3Q9NYW6 316 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 FOXJ3Q9UPW0 622 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 HILPDAQ9Y5L2 63 aa16.49■□□□□ 0.23
CHRNA3-207ENST00000559941 SLC33A1O00400 549 aaPredicted RBP16.48■□□□□ 0.23
CHRNA3-207ENST00000559941 GLIPR1P48060 266 aa16.48■□□□□ 0.23
CHRNA3-207ENST00000559941 MTNR1BP49286 362 aa16.48■□□□□ 0.23
CHRNA3-207ENST00000559941 SCN1BQ07699 218 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms