RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CST11Q9H112 138 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 DNTTIP1Q9H147 329 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 OR5V1Q9UGF6 321 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 TLN2Q9Y4G6 2542 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 ARHGAP32A7KAX9 2087 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 TMEM272A0A1B0GTI8 110 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 TMEM82A0PJX8 343 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 ZNF44P15621 663 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 EFNB2P52799 333 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 ASCC1Q8N9N2 400 aaKnown RBP12.7□□□□□ -0.38
NEDD1-213ENST00000557644 TMEM185AQ8NFB2 350 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 KCNG3Q8TAE7 436 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 Q96M66 194 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 NICN1Q9BSH3 213 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 TMEM59Q9BXS4 323 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 CHST6Q9GZX3 395 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 PCDHB16Q9NRJ7 776 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 HSPB6O14558 160 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 SH2D1BO14796 132 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 LDLRAD4O15165 306 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 ZNF737O75373 536 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 OR7C1O76099 320 aaPredicted RBP12.69□□□□□ -0.38
NEDD1-213ENST00000557644 GABRR1P24046 479 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 CAPZA1P52907 286 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 LCN2P80188 198 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 NHLRC3Q5JS37 347 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 WDR25Q64LD2 544 aaPredicted RBP12.69□□□□□ -0.38
NEDD1-213ENST00000557644 C17orf107Q6ZR85 190 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 ZNF561Q8N587 486 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 SSBP3Q9BWW4 388 aaPredicted RBP12.69□□□□□ -0.38
NEDD1-213ENST00000557644 CLN8Q9UBY8 286 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 ABCA1O95477 2261 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 DEGS1O15121 323 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 NOL3O60936 208 aaKnown RBP12.69□□□□□ -0.38
NEDD1-213ENST00000557644 HEXAP06865 529 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 CHRM2P08172 466 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 IGHV4-31P0DP07 118 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 GNB2P62879 340 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 ESCO2Q56NI9 601 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 BRICD5Q6PL45 260 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 LGALS14Q8TCE9 139 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 ST8SIA4Q92187 359 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 MRPS24Q96EL2 167 aaKnown RBP12.69□□□□□ -0.38
NEDD1-213ENST00000557644 MED30Q96HR3 178 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 SHARPINQ9H0F6 387 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 SLC25A10Q9UBX3 287 aaPredicted RBP12.69□□□□□ -0.38
NEDD1-213ENST00000557644 GLS2Q9UI32 602 aa12.69□□□□□ -0.38
NEDD1-213ENST00000557644 YLPM1P49750 1951 aaKnown RBP12.68□□□□□ -0.38
NEDD1-213ENST00000557644 A0A0A6YYD4 124 aa12.68□□□□□ -0.38
NEDD1-213ENST00000557644 TRAV24A0A0B4J272 114 aa12.68□□□□□ -0.38
NEDD1-213ENST00000557644 KIAA1324LA8MWY0 1029 aaPredicted RBP12.68□□□□□ -0.38
NEDD1-213ENST00000557644 SLC33A1O00400 549 aaPredicted RBP12.68□□□□□ -0.38
NEDD1-213ENST00000557644 RPS27AP62979 156 aaKnown RBP12.68□□□□□ -0.38
NEDD1-213ENST00000557644 IL13RA2Q14627 380 aa12.68□□□□□ -0.38
NEDD1-213ENST00000557644 OR2W3Q7Z3T1 314 aa12.68□□□□□ -0.38
NEDD1-213ENST00000557644 BIVMQ86UB2 503 aa12.68□□□□□ -0.38
NEDD1-213ENST00000557644 OR5H6Q8NGV6 325 aa12.68□□□□□ -0.38
NEDD1-213ENST00000557644 MSI2Q96DH6 328 aaKnown RBP12.68□□□□□ -0.38
NEDD1-213ENST00000557644 C18orf12Q96KH6 178 aa12.68□□□□□ -0.38
NEDD1-213ENST00000557644 SMR3AQ99954 134 aa12.68□□□□□ -0.38
NEDD1-213ENST00000557644 BCL7BQ9BQE9 202 aa12.68□□□□□ -0.38
NEDD1-213ENST00000557644 LPAR5Q9H1C0 372 aa12.68□□□□□ -0.38
NEDD1-213ENST00000557644 NDUFB3O43676 98 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 TK1P04183 234 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 FOXB2Q5VYV0 432 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 SIGIRRQ6IA17 410 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 RTN4RL2Q86UN3 420 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 BPIFB2Q8N4F0 458 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 OR4S1Q8NGB4 309 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 TMUB1Q9BVT8 246 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 PPA2Q9H2U2 334 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 RSL24D1Q9UHA3 163 aaKnown RBP12.67□□□□□ -0.38
NEDD1-213ENST00000557644 K7N7A8 449 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 NDUFB7P17568 137 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 LMO1P25800 156 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 LRRC10Q5BKY1 277 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 FBLN5Q9UBX5 448 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 F8P00451 2351 aa12.67□□□□□ -0.38
NEDD1-213ENST00000557644 CD99P14209 185 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 OR3A1P47881 315 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 RORCP51449 518 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 ATAD3CQ5T2N8 411 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 C1orf159Q96HA4 380 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 TM2D1Q9BX74 207 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 SEBOXQ9HB31 216 aaPredicted RBP12.66□□□□□ -0.38
NEDD1-213ENST00000557644 ING3Q9NXR8 418 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 DOCK11Q5JSL3 2073 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.66□□□□□ -0.388e-8■■■■□ 25
NEDD1-213ENST00000557644 C22orf46C9J442 243 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 INHBBP09529 407 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 GRK1Q15835 563 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 MPV17LQ2QL34 196 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 BTN2A1Q7KYR7 527 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 CROCCP3Q8IVE0 287 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 OR8H2Q8N162 312 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 TPRX1Q8N7U7 411 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 SUMF2Q8NBJ7 301 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 OR4M1Q8NGD0 313 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 DYNC2LI1Q8TCX1 351 aa12.66□□□□□ -0.38
NEDD1-213ENST00000557644 SNX22Q96L94 193 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms