RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 FAM72CH0Y354 149 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 FAM72AQ5TYM5 149 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 FAM72DQ6L9T8 149 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 FAM53AQ6NSI3 398 aaPredicted RBP7.92□□□□□ -1.14
SYNE3-205ENST00000557275 FAM72BQ86X60 149 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 MARVELD1Q9BSK0 173 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 C17orf51A8MQB3 221 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 M0R082 166 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 ALOX12BO75342 701 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 CST7O76096 145 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 HOXC5Q00444 222 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 KIR2DL4Q99706 377 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 PARP11Q9NR21 331 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 HMGA2P52926 109 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 C1orf61Q13536 156 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 SLC25A30Q5SVS4 291 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 RNF165Q6ZSG1 346 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 ROBO4Q8WZ75 1007 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 THADAQ6YHU6 1953 aa7.92□□□□□ -1.14
SYNE3-205ENST00000557275 C1QTNF9BB2RNN3 333 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 ADAM20O43506 726 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 CA11O75493 328 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 COL2A1P02458 1487 aaPredicted RBP7.91□□□□□ -1.14
SYNE3-205ENST00000557275 FOXA1P55317 472 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 C9orf135Q5VTT2 229 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 CCDC144NLQ6NUI1 221 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 SLC25A26Q70HW3 274 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 FBXL14Q8N1E6 418 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 PDXPQ96GD0 296 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 AKIP1Q9NQ31 210 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 IL17BQ9UHF5 180 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 A0A1W2PS18 150 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 CFDP00746 253 aaPredicted RBP7.91□□□□□ -1.14
SYNE3-205ENST00000557275 MAS1LP35410 378 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 RTP2Q5QGT7 225 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 C2orf88Q9BSF0 95 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 HS3ST3A1Q9Y663 406 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 GNG7O60262 68 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 FGF5P12034 268 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 ATP5IP56385 69 aaPredicted RBP7.91□□□□□ -1.14
SYNE3-205ENST00000557275 MRPL58Q14197 206 aaKnown RBP7.91□□□□□ -1.14
SYNE3-205ENST00000557275 IER5LQ5T953 404 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 FBXO27Q8NI29 283 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 THOC3Q96J01 351 aaKnown RBP7.91□□□□□ -1.14
SYNE3-205ENST00000557275 C19orf53Q9UNZ5 99 aaPredicted RBP7.91□□□□□ -1.14
SYNE3-205ENST00000557275 C3orf85A0A1B0GTC6 90 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 TMEM250H0YL14 139 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 TMEM189-UBE2V1I3L0A0 370 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 VDAC1P21796 283 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 HERPUD1Q15011 391 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 KMT5CQ86Y97 462 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 ZNF511Q8NB15 262 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 MBNL1Q9NR56 388 aaKnown RBP7.91□□□□□ -1.14
SYNE3-205ENST00000557275 DEFB119Q8N690 84 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 ZNF296Q8WUU4 475 aaPredicted RBP7.91□□□□□ -1.14
SYNE3-205ENST00000557275 ONECUT1Q9UBC0 465 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 ATP23Q9Y6H3 246 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 TAPBPO15533 448 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 AQP10Q96PS8 301 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 CD70P32970 193 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 CEACAM6P40199 344 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 ABHD17CQ6PCB6 329 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 IL23AQ9NPF7 189 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 WNT16Q9UBV4 365 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 A0A1B0GU03 582 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 CDS2O95674 445 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 CTSDP07339 412 aaPredicted RBP7.91□□□□□ -1.14
SYNE3-205ENST00000557275 PRDX2P32119 198 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 TMEM215Q68D42 235 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 OR8D4Q8NGM9 314 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 GEMIN7Q9H840 131 aaKnown RBP7.91□□□□□ -1.14
SYNE3-205ENST00000557275 BCL2L10Q9HD36 194 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 NWD2Q9ULI1 1742 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 WNT9BO14905 357 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 XKR7Q5GH72 579 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 SLCO4C1Q6ZQN7 724 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 RAB1BQ9H0U4 201 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 TXNRD2Q9NNW7 524 aa7.91□□□□□ -1.14
SYNE3-205ENST00000557275 GJB5O95377 273 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 ASTLQ6HA08 431 aaPredicted RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 MTFP1Q9UDX5 166 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 EPHA8P29322 1005 aaPredicted RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 Q96M85 177 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 CTXND1A0A1B0GTU2 59 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 C10orf113Q5VZT2 155 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 SPNS3Q6ZMD2 512 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 C12orf49Q9H741 205 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 LEPROTL1O95214 131 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 DDTP30046 118 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 SPACA9Q96E40 222 aaPredicted RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 PRKRAO75569 313 aaKnown RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 ZNF121P58317 390 aaPredicted RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 MAP1LC3AQ9H492 121 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 ZNF275Q9NSD4 429 aaPredicted RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 PGPEP1Q9NXJ5 209 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 CLEC2DQ9UHP7 191 aa7.9□□□□□ -1.14
SYNE3-205ENST00000557275 RBMY1BA6NDE4 496 aaKnown RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 RBMY1EA6NEQ0 496 aaKnown RBP7.9□□□□□ -1.14
SYNE3-205ENST00000557275 RBMY1DP0C7P1 496 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms