RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 AUNIPQ9H7T9 357 aa7.75□□□□□ -1.17
ACTN1-218ENST00000556343 AKIP1Q9NQ31 210 aa7.75□□□□□ -1.17
ACTN1-218ENST00000556343 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.75□□□□□ -1.17
ACTN1-218ENST00000556343 TAS2R8Q9NYW2 309 aa7.75□□□□□ -1.17
ACTN1-218ENST00000556343 A0A0A6YYD4 124 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 A0A0G2JMP0 313 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 A0A0X1KG70 313 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 F8VVB4 439 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 F8VWA3 439 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 WNT9BO14905 357 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 OR2H2O95918 312 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 HLA-DQB1P01920 261 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 MELTFP08582 738 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 PSG2P11465 335 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 GNB3P16520 340 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 COL8A2P25067 703 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 LMO1P25800 156 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 CHATP28329 748 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 DUSP1P28562 367 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 CD80P33681 288 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 ATP5J2P56134 94 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 AP3S2P59780 193 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 BTG1P62324 171 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 CARTPTQ16568 116 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 ZNF260Q3ZCT1 412 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 SPRNQ5BIV9 151 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 ATPAF1Q5TC12 328 aaPredicted RBP7.74□□□□□ -1.17
ACTN1-218ENST00000556343 SHEQ5VZ18 495 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 SFRP4Q6FHJ7 346 aaPredicted RBP7.74□□□□□ -1.17
ACTN1-218ENST00000556343 Q6P435 159 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 ZNF561Q8N587 486 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 SPICQ8N5J4 248 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 SUMF2Q8NBJ7 301 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 DEFB108BQ8NET1 73 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 OR4M2Q8NGB6 313 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 ARHGAP5-AS1Q96IT6 56 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 SNX22Q96L94 193 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 CMSS1Q9BQ75 279 aaKnown RBP7.74□□□□□ -1.17
ACTN1-218ENST00000556343 NICN1Q9BSH3 213 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 DPCDQ9BVM2 203 aaPredicted RBP7.74□□□□□ -1.17
ACTN1-218ENST00000556343 CHST6Q9GZX3 395 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 FAM234AQ9H0X4 552 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 WDR13Q9H1Z4 485 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 CHMP1AQ9HD42 196 aaPredicted RBP7.74□□□□□ -1.17
ACTN1-218ENST00000556343 IFT46Q9NQC8 304 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 BEX4Q9NWD9 120 aaPredicted RBP7.74□□□□□ -1.17
ACTN1-218ENST00000556343 ETAA1Q9NY74 926 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 MGAT4AQ9UM21 535 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 V9GYH0 126 aa7.74□□□□□ -1.17
ACTN1-218ENST00000556343 HELZ2Q9BYK8 2649 aaKnown RBP7.73□□□□□ -1.17
ACTN1-218ENST00000556343 IGHV3OR15-7A0A075B7D8 119 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 ISPDA4D126 451 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 NDUFS8O00217 210 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 SIRPB1O00241 398 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 GSTZ1O43708 216 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-218ENST00000556343 ECDO95905 644 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-218ENST00000556343 LPLP06858 475 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 INHBBP09529 407 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 PAX1P15863 534 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 EGR1P18146 543 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 GPR6P46095 362 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-218ENST00000556343 PTH2RP49190 550 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 TMEM50BP56557 158 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 DEFA1P59665 94 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 DEFA3P59666 94 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 ACTBP60709 375 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 ACTG1P63261 375 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 IL13RA1P78552 427 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 COL10A1Q03692 680 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 PDCD1Q15116 288 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 MOGAT2Q3SYC2 334 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 TMEM155Q4W5P6 130 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 LRRC10Q5BKY1 277 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 CLEC2AQ6UVW9 174 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 DCDC5Q6ZRR9 648 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 NLRC3Q7RTR2 1065 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 TRAPPC6BQ86SZ2 158 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 MFSD4AQ8N468 514 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 ASCC1Q8N9N2 400 aaKnown RBP7.73□□□□□ -1.17
ACTN1-218ENST00000556343 OR5T2Q8NGG2 359 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 ANGPTL6Q8NI99 470 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 YIPF5Q969M3 257 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 SDSLQ96GA7 329 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 ABHD1Q96SE0 405 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 THAP7Q9BT49 309 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-218ENST00000556343 FAAP24Q9BTP7 215 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 SRRQ9GZT4 340 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 PALMDQ9NP74 551 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 RAB9BQ9NP90 201 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 ZNF701Q9NV72 531 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-218ENST00000556343 RCC2Q9P258 522 aaKnown RBP7.73□□□□□ -1.17
ACTN1-218ENST00000556343 MIOXQ9UGB7 285 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 PCDHB10Q9UN67 800 aa7.73□□□□□ -1.17
ACTN1-218ENST00000556343 USP9YO00507 2555 aaPredicted RBP7.72□□□□□ -1.17
ACTN1-218ENST00000556343 UBE2QL1A1L167 161 aa7.72□□□□□ -1.17
ACTN1-218ENST00000556343 TMEM235A6NFC5 223 aa7.72□□□□□ -1.17
ACTN1-218ENST00000556343 CENPXA8MT69 81 aa7.72□□□□□ -1.17
ACTN1-218ENST00000556343 FOXI3A8MTJ6 420 aaPredicted RBP7.72□□□□□ -1.17
ACTN1-218ENST00000556343 SLC33A1O00400 549 aaPredicted RBP7.72□□□□□ -1.17
ACTN1-218ENST00000556343 MFNGO00587 321 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms