RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 GABRB1P18505 474 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 OR4S2Q8NH73 311 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 SCARB1Q8WTV0 552 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 LSM2Q9Y333 95 aaKnown RBP7.23□□□□□ -1.25
SYNE2-220ENST00000555612 AHRRA9YTQ3 701 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 J3KRW8 73 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 SLC25A5P05141 298 aaKnown RBP7.22□□□□□ -1.25
SYNE2-220ENST00000555612 FPR2P25090 351 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 TMEM128Q5BJH2 165 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 UQCC1Q9NVA1 299 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 CACNG5Q9UF02 275 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 SPAG17Q6Q759 2223 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 OOEPA6NGQ2 149 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 OIP5O43482 229 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 GNG7O60262 68 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 OR2B8PP59922 312 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 H3F3AP84243 136 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 FAM3AP98173 230 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 LINC00303Q3SY05 128 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 ABHD14AQ9BUJ0 271 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 TRAV39A0A0B4J263 110 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 C3orf85A0A1B0GTC6 90 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 LOC101059948A0A1B0GTJ6 334 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 UPK3AO75631 287 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 ARG1P05089 322 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 FAM87AP0C7U9 286 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 REG1BP48304 166 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 CSRP3P50461 194 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 MMDQ15546 238 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 VSTM2AQ8TAG5 236 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 PIMREGQ9BSJ6 248 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 GPR27Q9NS67 375 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 PCDHGA9Q9Y5G4 932 aaKnown RBP7.22□□□□□ -1.25
SYNE2-220ENST00000555612 TNS1Q9HBL0 1735 aaKnown RBP7.22□□□□□ -1.25
SYNE2-220ENST00000555612 A0A1W2PPE3 182 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 GDF9O60383 454 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 NTF3P20783 257 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 CTSSP25774 331 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 FCER1GP30273 86 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 PMELP40967 661 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 COL19A1Q14993 1142 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 KCNMB1Q16558 191 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 CLEC12BQ2HXU8 276 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF658BQ4V348 819 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-220ENST00000555612 CCDC190Q86UF4 302 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 MUC20Q8N307 709 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-220ENST00000555612 SMIM4Q8WVI0 70 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 ADTRPQ96IZ2 230 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 MAP6Q96JE9 813 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 PECRQ9BY49 303 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 RABAC1Q9UI14 185 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 ZMIZ1Q9ULJ6 1067 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 MCM3APO60318 1980 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 BGLAPP02818 100 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 ACAA2P42765 397 aaKnown RBP7.22□□□□□ -1.25
SYNE2-220ENST00000555612 RPS4XP62701 263 aaKnown RBP7.22□□□□□ -1.25
SYNE2-220ENST00000555612 SSBP1Q04837 148 aaKnown RBP7.22□□□□□ -1.25
SYNE2-220ENST00000555612 ZBTB37Q5TC79 503 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 ETV3LQ6ZN32 361 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 OR5AP2Q8NGF4 316 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 SMIM7Q9BQ49 75 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 CHRDL1Q9BU40 450 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 KCNK15Q9H427 330 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 TMEM231Q9H6L2 316 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 MRM2Q9UI43 246 aaKnown RBP7.22□□□□□ -1.25
SYNE2-220ENST00000555612 HS3ST3B1Q9Y662 390 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 J3QT63 122 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 GYPAP02724 150 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 CTF1Q16619 201 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 PLPPR5Q32ZL2 321 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 H3F3CQ6NXT2 135 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 SSX8Q7RTT4 187 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 OR8D4Q8NGM9 314 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 OR1B1Q8NGR6 318 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 CTDSP1Q9GZU7 261 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 NEU3Q9UQ49 428 aa7.22□□□□□ -1.25
SYNE2-220ENST00000555612 COL4A1P02462 1669 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 SCN1AP35498 2009 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF716A6NP11 495 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 NPIPB8E9PQR5 432 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 GEMIN2O14893 280 aaKnown RBP7.21□□□□□ -1.25
SYNE2-220ENST00000555612 SLC38A11Q08AI6 406 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 P2RY6Q15077 328 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 XAF1Q6GPH4 301 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 RPUSD3Q6P087 351 aaKnown RBP7.21□□□□□ -1.25
SYNE2-220ENST00000555612 PIGMQ9H3S5 423 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 CES1P1Q9UKY3 287 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 UMAD1C9J7I0 102 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 PPP5D1E7EU14 171 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 INPP5JQ15735 1006 aaPredicted RBP7.21□□□□□ -1.25
SYNE2-220ENST00000555612 C17orf47Q8NEP4 570 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 PPP1R1CQ8WVI7 109 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 R3HDM4Q96D70 268 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 CCL13Q99616 98 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 NEURL2Q9BR09 285 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 HILPDAQ9Y5L2 63 aa7.21□□□□□ -1.25
SYNE2-220ENST00000555612 A0A1B0GUH1 482 aa7.21□□□□□ -1.26
SYNE2-220ENST00000555612 RFPL4AA6NLU0 287 aa7.21□□□□□ -1.26
SYNE2-220ENST00000555612 RFPL4AL1F8VTS6 287 aa7.21□□□□□ -1.26
SYNE2-220ENST00000555612 MMP7P09237 267 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms