RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 CCDC159P0C7I6 412 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 ERP29P30040 261 aaKnown RBP11.17□□□□□ -0.62
PCNX4-209ENST00000555569 OR3A1P47881 315 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 EFNB2P52799 333 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 GBX2P52951 348 aaPredicted RBP11.17□□□□□ -0.62
PCNX4-209ENST00000555569 DEFA6Q01524 100 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 DYNC1I2Q13409 638 aaKnown RBP11.17□□□□□ -0.62
PCNX4-209ENST00000555569 PLA1AQ53H76 456 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 LDLRAD2Q5SZI1 272 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 SAXO1Q8IYX7 474 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 OR52I1Q8NGK6 324 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 OR5D18Q8NGL1 313 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 OR5AK2Q8NH90 309 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 RPS4Y2Q8TD47 263 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 NPFFR1Q9GZQ6 430 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 COMMD4Q9H0A8 199 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 RHOFQ9HBH0 211 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 ABCB10Q9NRK6 738 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 MRPS18AQ9NVS2 196 aaKnown RBP11.17□□□□□ -0.62
PCNX4-209ENST00000555569 SIGLEC9Q9Y336 463 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 RPL36Q9Y3U8 105 aaKnown RBP11.17□□□□□ -0.62
PCNX4-209ENST00000555569 PCDHGB5Q9Y5G0 923 aa11.17□□□□□ -0.62
PCNX4-209ENST00000555569 E9PI62 339 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 CHST1O43916 411 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 ALX3O95076 343 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 ZFPL1O95159 310 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 BAG2O95816 211 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 TSPAN15O95858 294 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 OR2H2O95918 312 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 HCKP08631 526 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 P2RX3P56373 397 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 HERPUD1Q15011 391 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 SSX2Q16385 188 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 C2orf68Q2NKX9 166 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 KLHL22Q53GT1 634 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 C11orf88Q6PI97 169 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 TRAPPC6BQ86SZ2 158 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 SERPINA12Q8IW75 414 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 DTX3Q8N9I9 347 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 ZNF555Q8NEP9 628 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 OR5D14Q8NGL3 314 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 OR2T6Q8NHC8 308 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 APH1BQ8WW43 257 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 NKX3-1Q99801 234 aaPredicted RBP11.16□□□□□ -0.62
PCNX4-209ENST00000555569 PDCD1LG2Q9BQ51 273 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 CDCA4Q9BXL8 241 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 TCF19Q9Y242 345 aa11.16□□□□□ -0.62
PCNX4-209ENST00000555569 UBE2J1Q9Y385 318 aaPredicted RBP11.16□□□□□ -0.62
PCNX4-209ENST00000555569 IGHV2-26A0A0B4J1V2 119 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 FUOMA2VDF0 154 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 SULT1B1O43704 296 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 TMEM225BP0DP42 221 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 ZNF44P15621 663 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 LMO1P25800 156 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 RAB13P51153 203 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 KISS1Q15726 138 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 MINOS1Q5TGZ0 78 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 LPCAT4Q643R3 524 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 Q6ZTK2 550 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 PARP16Q8N5Y8 322 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 HAVCR2Q8TDQ0 301 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 TSEN15Q8WW01 171 aaKnown RBP11.15□□□□□ -0.62
PCNX4-209ENST00000555569 RDH12Q96NR8 316 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 CLEC7AQ9BXN2 247 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 TMEM133Q9H2Q1 129 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 FGF20Q9NP95 211 aaPredicted RBP11.15□□□□□ -0.62
PCNX4-209ENST00000555569 SMPD3Q9NY59 655 aaPredicted RBP11.15□□□□□ -0.62
PCNX4-209ENST00000555569 PITPNC1Q9UKF7 332 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 FOXJ3Q9UPW0 622 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 DHDHQ9UQ10 334 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 MINOS1-NBL1R4GNA1 71 aa11.15□□□□□ -0.62
PCNX4-209ENST00000555569 TRGV10A0A0A0MS01 117 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 MEGF11A6BM72 1044 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 A6NDX4 124 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 WBP4O75554 376 aaKnown RBP11.14□□□□□ -0.63
PCNX4-209ENST00000555569 MMP23AO75900 390 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 LIMS3P0CW19 117 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 LIMS4P0CW20 117 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 DYNLT3P51808 116 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 ZP1P60852 638 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 SCN1BQ07699 218 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 ZSCAN26Q16670 478 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 ZNF691Q5VV52 312 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 Q6P435 159 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 CCBE1Q6UXH8 406 aaPredicted RBP11.14□□□□□ -0.63
PCNX4-209ENST00000555569 TMEM219Q86XT9 240 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 KLHDC1Q8N7A1 406 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 CHST4Q8NCG5 386 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 NDNFQ8TB73 568 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 CORO2AQ92828 525 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 JAM3Q9BX67 310 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 GAL3ST2Q9H3Q3 398 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 ZNF702PQ9H963 129 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 TAS2R3Q9NYW6 316 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 HILPDAQ9Y5L2 63 aa11.14□□□□□ -0.63
PCNX4-209ENST00000555569 A0A0G2JK05 382 aa11.13□□□□□ -0.63
PCNX4-209ENST00000555569 F2RL2O00254 374 aa11.13□□□□□ -0.63
PCNX4-209ENST00000555569 SLC33A1O00400 549 aaPredicted RBP11.13□□□□□ -0.63
PCNX4-209ENST00000555569 CSF1P09603 554 aa11.13□□□□□ -0.63
PCNX4-209ENST00000555569 GLIPR1P48060 266 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms