RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 DUX4L6P0CJ89 424 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DUX4L7P0CJ90 424 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PRTN3P24158 256 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 IMPA1P29218 277 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ATP5OP48047 213 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TFPI2P48307 235 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CD151P48509 253 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 NMUP48645 174 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CCR6P51684 374 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF140P52738 457 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SUB1P53999 127 aaKnown RBP eCLIP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 UGT2B15P54855 530 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 FGF8P55075 233 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CLDN18P56856 261 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 RPL26P61254 145 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PRB3Q04118 309 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 REG3AQ06141 175 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PRDX1Q06830 199 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PPIDQ08752 370 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 BAMBIQ13145 260 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 AQP6Q13520 282 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 FAM53BQ14153 422 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PAFAH1B3Q15102 231 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PSG5Q15238 335 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TMED2Q15363 201 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TAF1AQ15573 450 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TGFBIQ15582 683 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SGCAQ16586 387 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 GUCA2BQ16661 112 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ZBED5Q49AG3 693 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ACSBG2Q5FVE4 666 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PIGGQ5H8A4 983 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 COA6Q5JTJ3 125 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 NCMAPQ5T1S8 102 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DUX4L9Q6RFH8 374 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 OPN5Q6U736 354 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 H2AFVQ71UI9 128 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 LHFPL3Q86UP9 236 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PHF13Q86YI8 300 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CPNE9Q8IYJ1 553 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ENTHD1Q8IYW4 607 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PUSL1Q8N0Z8 303 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CA13Q8N1Q1 262 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 Q8N9L7 120 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DUSP18Q8NEJ0 188 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 AKR7LQ8NHP1 331 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ASZ1Q8WWH4 475 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SRSF12Q8WXF0 261 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 IL22RA2Q969J5 263 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ASB9Q96DX5 294 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF285Q96NJ3 590 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SDHCQ99643 169 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 RARRES2Q99969 163 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 OSBPL11Q9BXB4 747 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 LCE3DQ9BYE3 92 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DNTTIP1Q9H147 329 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DYNLRB1Q9NP97 96 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CBLN4Q9NTU7 201 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DUX4Q9UBX2 424 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 RPL26L1Q9UNX3 145 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 TFR2Q9UP52 801 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 WSB1Q9Y6I7 421 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 HERC1Q15751 4861 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 IGKV3D-11A0A0A0MRZ8 115 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 IGKV1D-13A0A0B4J2D9 117 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 IGHV3-64DA0A0J9YX35 117 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 A0A1B0GVI7 797 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 LOC285095A0A1B0GVY8 99 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CIB4A0PJX0 185 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PRSS37A4D1T9 235 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF726A6NNF4 738 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 DLGAP1O14490 977 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 GOSR2O14653 212 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SHOX2O60902 331 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ICOSLGO75144 302 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 UGT2B11O75310 529 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SUPT3HO75486 399 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 C1QAP02745 245 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CRYBA1P05813 215 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 MSMBP08118 114 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CT62P0C5K7 136 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 IGHV3-43DP0DP04 118 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 IGKV1-13P0DP09 117 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CPMP14384 443 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF708P17019 499 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PAX6P26367 422 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 AGTR1P30556 359 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 FOXN2P32314 431 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 MARCKSL1P49006 195 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CDK9P50750 372 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 RORCP51449 518 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 EFNA4P52798 201 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 CRISP3P54108 245 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 RPS15AP62244 130 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 SNRPD2P62316 118 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 MRPS22P82650 360 aaKnown RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 ENPEPQ07075 957 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 PLCXD2Q0VAA5 305 aa0.97□□□□□ -2.25
PRPF39-208ENST00000554785 MAD2L1BPQ15013 274 aaPredicted RBP0.97□□□□□ -2.25
PRPF39-208ENST00000554785 EBPQ15125 230 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms