RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ERICH3Q5RHP9 1530 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CFAP47Q6ZTR5 3102 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CEP170Q5SW79 1584 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 CAMSAP1Q5T5Y3 1602 aa1.55□□□□□ -2.16
VRK1-202ENST00000553683 FLNBO75369 2602 aaKnown RBP1.54□□□□□ -2.16
VRK1-202ENST00000553683 NAV2Q8IVL1 2488 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 TRBV11-1A0A0K0K1C0 115 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 A0A1W2PRG6 482 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 CIB4A0PJX0 185 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 HIDE1A8MVS5 230 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 OR11H12B2RN74 326 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 DISC1C4P0D8 188 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 CLDN34H7C241 214 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 M0QYV0 167 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 KPNA4O00629 521 aaPredicted RBP1.54□□□□□ -2.16
VRK1-202ENST00000553683 GOSR2O14653 212 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 AZIN1O14977 448 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 PPP1R2P9O14990 202 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 TGOLN2O43493 480 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 CHP2O43745 196 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 CHST1O43916 411 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 UGT2B11O75310 529 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 GCM2O75603 506 aaPredicted RBP1.54□□□□□ -2.16
VRK1-202ENST00000553683 ATP6V1G2O95670 118 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 SERPINA1P01009 418 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 IFNA21P01568 189 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 HLA-DQA1P01909 254 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 FGGP02679 453 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 S100A8P05109 93 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 HTR1AP08908 422 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 ACSM4P0C7M7 580 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 OR56A5P0C7T3 313 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 SCGB1A1P11684 91 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 GTF2F2P13984 249 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 ETS2P15036 469 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 SPI1P17947 270 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 RAB3BP20337 219 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 BGNP21810 368 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 CXCL12P48061 93 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 RORCP51449 518 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 DNAJB13P59910 316 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 PLP1P60201 277 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 LCN2P80188 198 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 TFAMQ00059 246 aaKnown RBP1.54□□□□□ -2.16
VRK1-202ENST00000553683 IL5RAQ01344 420 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 DEFA6Q01524 100 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 MEF2BQ02080 365 aaPredicted RBP1.54□□□□□ -2.16
VRK1-202ENST00000553683 AESQ08117 197 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 SELENBP1Q13228 472 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 TFDP2Q14188 446 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 GK3PQ14409 553 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 TRIP13Q15645 432 aaPredicted RBP1.54□□□□□ -2.16
VRK1-202ENST00000553683 PGGHGQ32M88 737 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 SYT6Q5T7P8 510 aaPredicted RBP1.54□□□□□ -2.16
VRK1-202ENST00000553683 RESP18Q5W5W9 173 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 SAXO2Q658L1 398 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 ULK3Q6PHR2 472 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 DNM1P34Q6PK57 102 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 UNQ9165/PRO28630Q6UXU0 137 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 SPNS3Q6ZMD2 512 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 H2BFWTQ7Z2G1 175 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 TMEM144Q7Z5S9 345 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 ANGPTL5Q86XS5 388 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 KRTAP13-1Q8IUC0 172 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 TGIF2LXQ8IUE1 241 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 WDFY1Q8IWB7 410 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 LGI3Q8N145 548 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 Q8N402 240 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 STX19Q8N4C7 294 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 LINC00304Q8N9R0 145 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 CDRT4Q8N9R6 151 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 PXT1Q8NFP0 134 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 OR2M7Q8NG81 312 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 OR11H1Q8NG94 326 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 OR8J3Q8NGG0 315 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 OR1L4Q8NGR5 311 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 OR11H2Q8NH07 326 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 OR4K15Q8NH41 348 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 OR52E5Q8NH55 327 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 STOML3Q8TAV4 291 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 FAM110BQ8TC76 370 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 LGALS14Q8TCE9 139 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 DYNC2LI1Q8TCX1 351 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 APH1BQ8WW43 257 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 C11orf40Q8WZ69 217 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 TCEAL3Q969E4 200 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 PTH2Q96A98 100 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 YIPF6Q96EC8 236 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 WDR34Q96EX3 536 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 C12orf42Q96LP6 360 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 SERPINB11Q96P15 392 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 HBEGFQ99075 208 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 TSNAXQ99598 290 aaKnown RBP1.54□□□□□ -2.16
VRK1-202ENST00000553683 NAPGQ99747 312 aaPredicted RBP1.54□□□□□ -2.16
VRK1-202ENST00000553683 FOXC2Q99958 501 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 TMEM208Q9BTX3 173 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 KIFC1Q9BW19 673 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 ULBP1Q9BZM6 244 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 PORCNQ9H237 461 aa1.54□□□□□ -2.16
VRK1-202ENST00000553683 BOLA2Q9H3K6 86 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms