RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 RCBTB2O95199 551 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 TBX6O95947 436 aaPredicted RBP3.52□□□□□ -1.85
RDH11-204ENST00000553578 H1F0P07305 194 aaKnown RBP3.52□□□□□ -1.85
RDH11-204ENST00000553578 PGA4P0DJD7 388 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 PGA5P0DJD9 388 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 GATA3P23771 443 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 CRYBB2P43320 205 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 HMGA2P52926 109 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 MVDP53602 400 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 TEAD2Q15562 447 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 ZIC1Q15915 447 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 TMEM183BQ1AE95 376 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 CEACAM21Q3KPI0 293 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 DCST2Q5T1A1 773 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 RHBDD2Q6NTF9 364 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 ZNF585AQ6P3V2 769 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 PQLC2Q6ZP29 291 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 TCF24Q7RTU0 167 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 RAB42Q8N4Z0 105 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 STPG4Q8N801 248 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 ZNF709Q8N972 641 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 OR5AK3PQ8NH89 298 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 NEIL3Q8TAT5 605 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 APH1BQ8WW43 257 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 PNPLA2Q96AD5 504 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 IL4I1Q96RQ9 567 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 GPA33Q99795 319 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 CHRDL1Q9BU40 450 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 SMIM3Q9BZL3 60 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 UBE2ZQ9H832 354 aaPredicted RBP3.52□□□□□ -1.85
RDH11-204ENST00000553578 SLC25A19Q9HC21 320 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 WFDC1Q9HC57 220 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 CACFD1Q9UGQ2 172 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 FZR1Q9UM11 496 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 PIGLQ9Y2B2 252 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 RFNGQ9Y644 331 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 COX11Q9Y6N1 276 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 KNL1Q8NG31 2342 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 PIKFYVEQ9Y2I7 2098 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 A0A0B4J2A0 478 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 IGHV2-70DA0A0C4DH43 119 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 A0A1B0GU03 582 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 ZNF724A8MTY0 619 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 H0YIG0 161 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 HRKO00198 91 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 MFNGO00587 321 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 XKRYO14609 159 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 RBFOX2O43251 390 aaKnown RBP eCLIP3.52□□□□□ -1.85
RDH11-204ENST00000553578 TSPAN15O95858 294 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 HAND1O96004 215 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 CTSDP07339 412 aaPredicted RBP3.52□□□□□ -1.85
RDH11-204ENST00000553578 OR13C7P0DN81 318 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 CEACAM1P13688 526 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 PRDX3P30048 256 aaKnown RBP3.52□□□□□ -1.85
RDH11-204ENST00000553578 GRPRP30550 384 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 MPLP40238 635 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 GABRA2P47869 451 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 PDLIM4P50479 330 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 NTHL1P78549 312 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 TPBGQ13641 420 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 CR1LQ2VPA4 569 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 BSXQ3C1V8 233 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 PAGE3Q5JUK9 113 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 ZNF684Q5T5D7 378 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 METRNLQ641Q3 311 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 ZNF343Q6P1L6 599 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 ZNF562Q6V9R5 426 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 PTOV1Q86YD1 416 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 OR6V1Q8N148 313 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 MUC15Q8N387 334 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 LRTM2Q8N967 370 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 ZNF548Q8NEK5 533 aaPredicted RBP3.52□□□□□ -1.85
RDH11-204ENST00000553578 OR2T27Q8NH04 317 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 OR4S2Q8NH73 311 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 OR2AE1Q8NHA4 323 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 SFXN5Q8TD22 340 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 NUDCD2Q8WVJ2 157 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 SORCS1Q8WY21 1168 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 FRZBQ92765 325 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 LHX4Q969G2 390 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 GLYATL1Q969I3 302 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 CTHRC1Q96CG8 243 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 SPAG8Q99932 426 aaPredicted RBP3.52□□□□□ -1.85
RDH11-204ENST00000553578 FAM110AQ9BQ89 295 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 ADGRL4Q9HBW9 690 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 LYRM2Q9NU23 88 aaPredicted RBP3.52□□□□□ -1.85
RDH11-204ENST00000553578 SHPKQ9UHJ6 478 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.52□□□□□ -1.85
RDH11-204ENST00000553578 MTCH2Q9Y6C9 303 aa3.52□□□□□ -1.85
RDH11-204ENST00000553578 NUMA1Q14980 2115 aa3.51□□□□□ -1.85
RDH11-204ENST00000553578 TRAV39A0A0B4J263 110 aa3.51□□□□□ -1.85
RDH11-204ENST00000553578 TRBV4-1A0A0J9YWV2 114 aa3.51□□□□□ -1.85
RDH11-204ENST00000553578 A0A1B0GV50 99 aa3.51□□□□□ -1.85
RDH11-204ENST00000553578 ZNF727A8MUV8 499 aa3.51□□□□□ -1.85
RDH11-204ENST00000553578 G3V3Y1 287 aa3.51□□□□□ -1.85
RDH11-204ENST00000553578 RNASET2O00584 256 aaKnown RBP3.51□□□□□ -1.85
RDH11-204ENST00000553578 PCDH7O60245 1069 aa3.51□□□□□ -1.85
RDH11-204ENST00000553578 LDB3O75112 727 aa3.51□□□□□ -1.85
RDH11-204ENST00000553578 CLDN7O95471 211 aa3.51□□□□□ -1.85
RDH11-204ENST00000553578 SERPINA7P05543 415 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms