RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 SSBP3Q9BWW4 388 aaPredicted RBP12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 BANF2Q9H503 90 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 PLGRKTQ9HBL7 147 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 RCC2Q9P258 522 aaKnown RBP12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 OR14J1Q9UGF5 321 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 PCDHB10Q9UN67 800 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 ST3GAL6Q9Y274 331 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 CEPT1Q9Y6K0 416 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 MXRA5Q9NR99 2828 aa12.3□□□□□ -0.44
MTHFD1-204ENST00000553405 WNK2Q9Y3S1 2297 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 A0A0A6YYD4 124 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 NKX6-3A6NJ46 265 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 FOXI3A8MTJ6 420 aaPredicted RBP12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 B4DSR2 109 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 SLC33A1O00400 549 aaPredicted RBP12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 IL1AP01583 271 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 CHRM2P08172 466 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 GTF2F2P13984 249 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 MGMTP16455 207 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 GABRA2P47869 451 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 OR3A1P47881 315 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 GZMKP49863 264 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 TMBIM6P55061 237 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 RPS27AP62979 156 aaKnown RBP12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 GPR176Q14439 515 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 METAP1DQ6UB28 335 aaPredicted RBP12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 NLRC3Q7RTR2 1065 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 OR2W3Q7Z3T1 314 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 CLVS1Q8IUQ0 354 aaPredicted RBP12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 LINC01356Q8N9X3 169 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 OR51D1Q8NGF3 324 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 MED30Q96HR3 178 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 TM2D1Q9BX74 207 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 BARHL1Q9BZE3 327 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 FAM234AQ9H0X4 552 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 ELL3Q9HB65 397 aaPredicted RBP12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 MMP26Q9NRE1 261 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 CLN8Q9UBY8 286 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 DSCAML1Q8TD84 2053 aa12.29□□□□□ -0.44
MTHFD1-204ENST00000553405 PPIAL4CA0A0B4J2A2 164 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 TMEM272A0A1B0GTI8 110 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 CD5LO43866 347 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 LY6G6DO95868 133 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 TK1P04183 234 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 MSMBP08118 114 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 ARSBP15848 533 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 ZNF16P17020 682 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 NPY4RP50391 375 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 EFNB2P52799 333 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 CAPZA1P52907 286 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 LCN2P80188 198 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 IKZF1Q13422 519 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 SPCS2Q15005 226 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 PDCD1Q15116 288 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 C11orf91Q3C1V1 193 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 C2orf76Q3KRA6 126 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 ESCO2Q56NI9 601 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 FAM89BQ8N5H3 189 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 LY6G5BQ8NDX9 201 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 OR4S1Q8NGB4 309 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 KCNG3Q8TAE7 436 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 C8orf46Q8TAG6 207 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 NDNFQ8TB73 568 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 FAM46BQ96A09 425 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 SLC25A46Q96AG3 418 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 BCL7BQ9BQE9 202 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 LPAR5Q9H1C0 372 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 LIN7BQ9HAP6 207 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 SLC25A10Q9UBX3 287 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 OR5V1Q9UGF6 321 aa12.28□□□□□ -0.44
MTHFD1-204ENST00000553405 FN1P02751 2386 aaKnown RBP12.27□□□□□ -0.44
MTHFD1-204ENST00000553405 FAM90A10PA6NDY2 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A18PA6NE21 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A16PA6NEW6 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A20PA6NIJ5 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A8PA6NJQ4 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A7PA6NKC0 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A22PA8MWA6 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A12PA8MX19 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A5PA8MXJ8 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A23PA8MXZ1 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 SIRPB1O00241 398 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 SH2D1BO14796 132 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 NDUFB3O43676 98 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FOXH1O75593 365 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 CRTAPO75718 401 aaPredicted RBP12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 CSTBP04080 98 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 HEXAP06865 529 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A15PP0C7V4 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A13PP0C7W8 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A14PP0C7W9 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FAM90A24PP0C7X0 464 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 PAX5Q02548 391 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 TAF9Q16594 264 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 MPV17LQ2QL34 196 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 CYB5R2Q6BCY4 276 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 FIP1L1Q6UN15 594 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 TCF23Q7RTU1 214 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 LINC00596Q86U02 117 aa12.27□□□□□ -0.45
MTHFD1-204ENST00000553405 RTN4RL2Q86UN3 420 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms