RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 MEGF8Q7Z7M0 2845 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 IGKV1-12A0A0C4DH73 117 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 hADV38S2A0JD32 116 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 M0QZ24 198 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 SIRPB1O00241 398 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 TIMM23O14925 209 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 ZFPL1O95159 310 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 IGKV1D-12P01611 117 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 IGHV1-8P0DP01 117 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 MYL12AP19105 171 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 GABRA5P31644 462 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 GTF2A1P52655 376 aaPredicted RBP12.88□□□□□ -0.35
CDK4-215ENST00000553237 AQP4P55087 323 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 MEF2CQ06413 473 aaPredicted RBP12.88□□□□□ -0.35
CDK4-215ENST00000553237 DYNC1I2Q13409 638 aaKnown RBP12.88□□□□□ -0.35
CDK4-215ENST00000553237 OR2G6Q5TZ20 316 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 TMPRSS11AQ6ZMR5 421 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 DYNAPQ8N1N2 210 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 OR13D1Q8NGV5 346 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 PIFOQ8TCI5 191 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 TMEM80Q96HE8 168 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 ZNF714Q96N38 554 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 ZCCHC4Q9H5U6 513 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 NEK6Q9HC98 313 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 HMG20AQ9NP66 347 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 CLEC2DQ9UHP7 191 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 GLS2Q9UI32 602 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 GSTK1Q9Y2Q3 226 aa12.88□□□□□ -0.35
CDK4-215ENST00000553237 WNK1Q9H4A3 2382 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 EFCAB10A6NFE3 127 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 FAM90A8PA6NJQ4 464 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 TMEM212A6NML5 194 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 H0YJX3 145 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 XPNPEP2O43895 674 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 CCDC159P0C7I6 412 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 RAB13P51153 203 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 ST3GAL4Q11206 333 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 ZNF146Q15072 292 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 FAM189A2Q15884 450 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 AANATQ16613 207 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 BPIFB6Q8NFQ5 453 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 OR5AK2Q8NH90 309 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 HAVCR2Q8TDQ0 301 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 PDCD1LG2Q9BQ51 273 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 COMMD4Q9H0A8 199 aa12.87□□□□□ -0.35
CDK4-215ENST00000553237 SEBOXQ9HB31 216 aaPredicted RBP12.87□□□□□ -0.35
CDK4-215ENST00000553237 CHCHD3Q9NX63 227 aaKnown RBP12.87□□□□□ -0.35
CDK4-215ENST00000553237 EXOSC1Q9Y3B2 195 aaKnown RBP12.87□□□□□ -0.35
CDK4-215ENST00000553237 ODF3BA8MYP8 253 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 SH2D1BO14796 132 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 MGST3O14880 152 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 CHST1O43916 411 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 RBP4P02753 201 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 MT-ND2P03891 347 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 HCKP08631 526 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 OR3A1P47881 315 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 SCN1BQ07699 218 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 MED21Q13503 144 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 SSX2Q16385 188 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 SPIN3Q5JUX0 258 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 LDLRAD2Q5SZI1 272 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 XAF1Q6GPH4 301 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 CRIP3Q6Q6R5 217 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 TRAPPC6BQ86SZ2 158 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 OR11H6Q8NGC7 330 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 NKX3-1Q99801 234 aaPredicted RBP12.86□□□□□ -0.35
CDK4-215ENST00000553237 EXOSC4Q9NPD3 245 aaKnown RBP12.86□□□□□ -0.35
CDK4-215ENST00000553237 PLCXD1Q9NUJ7 323 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 BABAM2Q9NXR7 383 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 CNOT2Q9NZN8 540 aaKnown RBP12.86□□□□□ -0.35
CDK4-215ENST00000553237 FBLN5Q9UBX5 448 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 PSORS1C1Q9UIG5 152 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 LINC00312Q9Y6C7 94 aa12.86□□□□□ -0.35
CDK4-215ENST00000553237 MMP23AO75900 390 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 KDM4BO94953 1096 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 OR2H2O95918 312 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 RPSAP08865 295 aaKnown RBP12.85□□□□□ -0.35
CDK4-215ENST00000553237 TMEM225BP0DP42 221 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 KIR2DS4P43632 304 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 DEFA6Q01524 100 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 CCDC58Q4VC31 144 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 ZNF626Q68DY1 528 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 HIST2H2BDQ6DRA6 164 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 RPL22L1Q6P5R6 122 aaKnown RBP12.85□□□□□ -0.35
CDK4-215ENST00000553237 AHSA2Q719I0 299 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 SERPINA12Q8IW75 414 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 OR4C13Q8NGP0 309 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 TSEN15Q8WW01 171 aaKnown RBP12.85□□□□□ -0.35
CDK4-215ENST00000553237 MALSU1Q96EH3 234 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 ING3Q9NXR8 418 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 DHDHQ9UQ10 334 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 TBL2Q9Y4P3 447 aaKnown RBP12.85□□□□□ -0.35
CDK4-215ENST00000553237 SESN1Q9Y6P5 492 aa12.85□□□□□ -0.35
CDK4-215ENST00000553237 MEGF11A6BM72 1044 aa12.84□□□□□ -0.35
CDK4-215ENST00000553237 TSPAN15O95858 294 aa12.84□□□□□ -0.35
CDK4-215ENST00000553237 ZNF44P15621 663 aa12.84□□□□□ -0.35
CDK4-215ENST00000553237 JUNBP17275 347 aaPredicted RBP12.84□□□□□ -0.35
CDK4-215ENST00000553237 C21orf33P30042 268 aaPredicted RBP12.84□□□□□ -0.35
CDK4-215ENST00000553237 SOX2P48431 317 aa12.84□□□□□ -0.35
CDK4-215ENST00000553237 P2RX3P56373 397 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms