RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 GNG13Q9P2W3 67 aa11.29□□□□□ -0.6
BRF1-210ENST00000547374 IGHV5-10-1A0A0J9YXX1 117 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 TERTO14746 1132 aaKnown RBP11.28□□□□□ -0.6
BRF1-210ENST00000547374 ZNF611Q8N823 705 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 FGFBP3Q8TAT2 258 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 SMIM8Q96KF7 97 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 SRXN1Q9BYN0 137 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 TMEM100Q9NV29 134 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 HDGFL3Q9Y3E1 203 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 IGKV1-27A0A075B6S5 117 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 A0A0G2JMM0 328 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 A0A1W2PPB8 328 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 A0A1W2PRS3 328 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 KIR3DP1A8MWS1 328 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 P04436 131 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 RPS2P15880 293 aaKnown RBP11.28□□□□□ -0.6
BRF1-210ENST00000547374 EIF1P41567 113 aaKnown RBP11.28□□□□□ -0.6
BRF1-210ENST00000547374 CXCL12P48061 93 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 SSR4P51571 173 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 SUMO3P55854 103 aaPredicted RBP11.28□□□□□ -0.6
BRF1-210ENST00000547374 TMEM267Q0VDI3 215 aaPredicted RBP11.28□□□□□ -0.6
BRF1-210ENST00000547374 ZNF154Q13106 437 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 RABEPKQ7Z6M1 372 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 CPNE4Q96A23 557 aaPredicted RBP11.28□□□□□ -0.6
BRF1-210ENST00000547374 TWSG1Q9GZX9 223 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 CACFD1Q9UGQ2 172 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 CTSDP07339 412 aaPredicted RBP11.28□□□□□ -0.6
BRF1-210ENST00000547374 H2AFB1P0C5Y9 115 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 RAB11AP62491 216 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 CNN3Q15417 329 aaKnown RBP11.28□□□□□ -0.6
BRF1-210ENST00000547374 THNSL2Q86YJ6 484 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 CALHM1Q8IU99 346 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 NECAP1Q8NC96 275 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 BCO1Q9HAY6 547 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 SLC7A10Q9NS82 523 aa11.28□□□□□ -0.6
BRF1-210ENST00000547374 TCN2P20062 427 aa11.27□□□□□ -0.6
BRF1-210ENST00000547374 RAB5AP20339 215 aa11.27□□□□□ -0.6
BRF1-210ENST00000547374 BMP5P22003 454 aa11.27□□□□□ -0.6
BRF1-210ENST00000547374 CHATP28329 748 aa11.27□□□□□ -0.6
BRF1-210ENST00000547374 ELLP55199 621 aaPredicted RBP11.27□□□□□ -0.6
BRF1-210ENST00000547374 HGFACQ04756 655 aa11.27□□□□□ -0.6
BRF1-210ENST00000547374 LHFPL1Q86WI0 220 aa11.27□□□□□ -0.6
BRF1-210ENST00000547374 OR1F12Q8NHA8 337 aa11.27□□□□□ -0.6
BRF1-210ENST00000547374 TCTEX1D2Q8WW35 142 aa11.27□□□□□ -0.6
BRF1-210ENST00000547374 COA4Q9NYJ1 87 aa11.27□□□□□ -0.6
BRF1-210ENST00000547374 CRYM-AS1A6NIL9 109 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 TK1P04183 234 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 SCTP09683 121 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 ATP6V0CP27449 155 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 PTGDSP41222 190 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 SRSF4Q08170 494 aaKnown RBP11.27□□□□□ -0.61
BRF1-210ENST00000547374 BTNL8Q6UX41 500 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 BEND4Q6ZU67 534 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 TRBV6-7A0A0A0MS04 114 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 IGKV1-12A0A0C4DH73 117 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 C5orf49A4QMS7 147 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 IGKV1D-12P01611 117 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 NR2C1P13056 603 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 S100A2P29034 98 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 ZNF133P52736 654 aaPredicted RBP11.27□□□□□ -0.61
BRF1-210ENST00000547374 RPL23AP62750 156 aaKnown RBP11.27□□□□□ -0.61
BRF1-210ENST00000547374 FAM209BQ5JX69 171 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 ZNF561Q8N587 486 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 OR2C3Q8N628 320 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 PFDN5Q99471 154 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 PARP11Q9NR21 331 aa11.27□□□□□ -0.61
BRF1-210ENST00000547374 FAM166BA8MTA8 275 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 ZXDAP98168 799 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 EWSR1Q01844 656 aaKnown RBP eCLIP11.26□□□□□ -0.61
BRF1-210ENST00000547374 GAPTQ8N292 157 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 EXTL1Q92935 676 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 Q96M66 194 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 PLEKHA2Q9HB19 425 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 CCL28Q9NRJ3 127 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 RIF1Q5UIP0 2472 aaKnown RBP11.26□□□□□ -0.61
BRF1-210ENST00000547374 RFPL3SP0C7P2 107 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 PRF1P14222 555 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 CFPP27918 469 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 SNCAP37840 140 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 C3AR1Q16581 482 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 RSPO1Q2MKA7 263 aaPredicted RBP11.26□□□□□ -0.61
BRF1-210ENST00000547374 LIAT1Q6ZQX7 453 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 STX12Q86Y82 276 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 OR56B2PQ8NGI1 322 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 PLPPR2Q96GM1 343 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 HIST1H2AAQ96QV6 131 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 CHCHD2Q9Y6H1 151 aaPredicted RBP11.26□□□□□ -0.61
BRF1-210ENST00000547374 A0A1W2PNV4 684 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 CYB5BO43169 146 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 MT-ND4LP03901 98 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 PLA2G5P39877 138 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 DYNLT3P51808 116 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 RAB2AP61019 212 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 ARL6IP1Q15041 203 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 TBC1D26Q86UD7 250 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 FOXB1Q99853 325 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 SLC35B3Q9H1N7 401 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 UCK1Q9HA47 277 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 PPP1R3CQ9UQK1 317 aa11.26□□□□□ -0.61
BRF1-210ENST00000547374 DSPP15924 2871 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms