RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 IL13RA2Q14627 380 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CTF1Q16619 201 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 C2orf76Q3KRA6 126 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 OR10K2Q6IF99 312 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SFXN4Q6P4A7 337 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 FGFRL1Q8N441 504 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 KCNG3Q8TAE7 436 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 H1FXQ92522 213 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 C1orf159Q96HA4 380 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SMR3AQ99954 134 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TMEM59Q9BXS4 323 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 LIN7BQ9HAP6 207 aa12.03□□□□□ -0.48
TNFRSF1A-216ENST00000543995 IL1AP01583 271 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TK1P04183 234 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ZFP36P26651 326 aaKnown RBP12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CFPP27918 469 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 RPS19P39019 145 aaKnown RBP12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TAF9Q16594 264 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 NHLRC3Q5JS37 347 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 IDNKQ5T6J7 187 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 OR2W3Q7Z3T1 314 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 LINC00596Q86U02 117 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 PPP1R35Q8TAP8 253 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 RAB2BQ8WUD1 216 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CHST6Q9GZX3 395 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 FAM234AQ9H0X4 552 aa12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SEBOXQ9HB31 216 aaPredicted RBP12.02□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ARHGAP32A7KAX9 2087 aa12.02□□□□□ -0.49
TNFRSF1A-216ENST00000543995 LOC105371242A0A075B767 164 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 A0A0B4J203 849 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 CCDC160A6NGH7 325 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 KIAA1324LA8MWY0 1029 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 A8MXK9 166 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 K7N7A8 449 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 HSPB6O14558 160 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FCN3O75636 299 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 TMBIM6P55061 237 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 UNC119Q13432 240 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 MPV17LQ2QL34 196 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ATAD3CQ5T2N8 411 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 CD276Q5ZPR3 534 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 Q6P435 159 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 METAP1DQ6UB28 335 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 USP43Q70EL4 1123 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 BTN2A1Q7KYR7 527 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 GDPD3Q7L5L3 318 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 BIVMQ86UB2 503 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 GLCCI1Q86VQ1 547 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 CROCCP3Q8IVE0 287 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 CHST4Q8NCG5 386 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 TMEM186Q96B77 213 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 SNX22Q96L94 193 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PPA2Q9H2U2 334 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 HIF1ANQ9NWT6 349 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 MAP1AP78559 2803 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 TRAV20A0A0B4J274 112 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 TMEM272A0A1B0GTI8 110 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 TMEM82A0PJX8 343 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 TMEM14DPA8MWL7 114 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 SLC33A1O00400 549 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 GPR37O15354 613 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 CD5LO43866 347 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PSPNO60542 156 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ZNF737O75373 536 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 LY6G6DO95868 133 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 LMO1P25800 156 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 RPS27AP62979 156 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 QRFPP83859 136 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 GRK1Q15835 563 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 PAN3Q58A45 887 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 OR8H2Q8N162 312 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 OR5D13Q8NGL4 314 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 Q96M66 194 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 URM1Q9BTM9 101 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 DCSTAMPQ9H295 470 aa12.01□□□□□ -0.49
TNFRSF1A-216ENST00000543995 MED13LQ71F56 2210 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ABCA2Q9BZC7 2435 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 MALRD1Q5VYJ5 2156 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ECDO95905 644 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 EDDM3BP56851 147 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 KRTAP1-1Q07627 177 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 EDDM3AQ14507 147 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 DCAF12L2Q5VW00 463 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 BTNL3Q6UXE8 466 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 CLEC9AQ6UXN8 241 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 C17orf107Q6ZR85 190 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 OR4S1Q8NGB4 309 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 NDNFQ8TB73 568 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 SLC25A46Q96AG3 418 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 SHARPINQ9H0F6 387 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 MMP26Q9NRE1 261 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 ZNF581Q9P0T4 197 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 RAB22AQ9UL26 194 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 POLR3KQ9Y2Y1 108 aaPredicted RBP12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 CELSR1Q9NYQ6 3014 aa12□□□□□ -0.49
TNFRSF1A-216ENST00000543995 TRAV24A0A0B4J272 114 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 A0A0G2JMP0 313 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 A0A0X1KG70 313 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 A0A1W2PQ09 198 aa11.99□□□□□ -0.49
TNFRSF1A-216ENST00000543995 FAM90A10PA6NDY2 464 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms