RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 LILRB1Q8NHL6 650 aaPredicted RBP8.22□□□□□ -1.09
CNOT4-212ENST00000541284 SMCO4Q9NRQ5 59 aa8.22□□□□□ -1.09
CNOT4-212ENST00000541284 KPTNQ9Y664 436 aa8.22□□□□□ -1.09
CNOT4-212ENST00000541284 DMXL1Q9Y485 3027 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 ZNF850A8MQ14 1090 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 CBR3O75828 277 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 IFNA21P01568 189 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 PPP1CCP36873 323 aaKnown RBP8.21□□□□□ -1.09
CNOT4-212ENST00000541284 CXCL12P48061 93 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 PPT1P50897 306 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 FXYD4P59646 89 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 IL13RA2Q14627 380 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 HERPUD1Q15011 391 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 CNN3Q15417 329 aaKnown RBP8.21□□□□□ -1.09
CNOT4-212ENST00000541284 GUK1Q16774 197 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 IGSF11Q5DX21 431 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 GPR157Q5UAW9 335 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 CPEB3Q8NE35 698 aaKnown RBP8.21□□□□□ -1.09
CNOT4-212ENST00000541284 TMEM171Q8WVE6 324 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 C14orf79Q96F83 325 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 TUBA4BQ9H853 241 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 DKKL1Q9UK85 242 aa8.21□□□□□ -1.09
CNOT4-212ENST00000541284 PTRH2Q9Y3E5 179 aaKnown RBP8.21□□□□□ -1.09
CNOT4-212ENST00000541284 A0A1B0GW64 132 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 IGSF23A1L1A6 192 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 UBE2CO00762 179 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 PDCD6O75340 191 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 IFNA4P05014 189 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 HOXB1P14653 301 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-212ENST00000541284 GNRHRP30968 328 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 MAS1LP35410 378 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 PMELP40967 661 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 SPSB3Q6PJ21 355 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 Q6ZS49 121 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 C19orf12Q9NSK7 152 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 DEPPQ9NTK1 212 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 P4HTMQ9NXG6 502 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 ST3GAL6Q9Y274 331 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 SIT1Q9Y3P8 196 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 MED19A0JLT2 244 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-212ENST00000541284 C7orf77A4D0Y5 90 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 PINLYPA6NC86 204 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 CCDC85CA6NKD9 419 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 TMEM50AO95807 157 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF883P0CG24 379 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 RNF212Q495C1 297 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 YRDCQ86U90 279 aaKnown RBP8.21□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF295-AS1Q8N0V1 137 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 COMMD1Q8N668 190 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 OR2Y1Q8NGV0 311 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 IFI44Q8TCB0 444 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 ABHD14AQ9BUJ0 271 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 C1QTNF5Q9BXJ0 243 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 BCO1Q9HAY6 547 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 SEBOXQ9HB31 216 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-212ENST00000541284 PLSCR2Q9NRY7 297 aa8.21□□□□□ -1.1
CNOT4-212ENST00000541284 FAM212BQ9NTI7 297 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-212ENST00000541284 YKT6O15498 198 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 PDGFBP01127 241 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-212ENST00000541284 IGHV2-5P01817 119 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 LCATP04180 440 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 PTAFRP25105 342 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 DUSP1P28562 367 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 GUCA1AP43080 201 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-212ENST00000541284 CCL20P78556 96 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 EWSR1Q01844 656 aaKnown RBP eCLIP8.2□□□□□ -1.1
CNOT4-212ENST00000541284 TMEM211Q6ICI0 200 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 RBMS3Q6XE24 437 aaKnown RBP8.2□□□□□ -1.1
CNOT4-212ENST00000541284 RPS19BP1Q86WX3 136 aaKnown RBP8.2□□□□□ -1.1
CNOT4-212ENST00000541284 BORCS8Q96FH0 119 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 JSRP1Q96MG2 331 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-212ENST00000541284 TMEM56Q96MV1 263 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 SYT3Q9BQG1 590 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 GPR35Q9HC97 309 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 TMEM56-RWDD3S4R434 201 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 NSG1A0A0A6YYJ2 146 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 IGKV1-6A0A0C4DH72 117 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 NKX2-6A6NCS4 301 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 A6NLC8 198 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 NAPSAO96009 420 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 PPYP01298 95 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 DAOP14920 347 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 EPHA1P21709 976 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 SRD5A2P31213 254 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 AKR1D1P51857 326 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 SNRPEP62304 92 aaKnown RBP8.2□□□□□ -1.1
CNOT4-212ENST00000541284 SMCO1Q147U7 214 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 FAM76BQ5HYJ3 339 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 LYSMD4Q5XG99 296 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 ISOC2Q96AB3 205 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 SIGLEC12Q96PQ1 595 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 FOXB1Q99853 325 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 GLRX2Q9NS18 164 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 A0A1W2PPH5 198 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 CLEC18AA5D8T8 446 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 ZNF503-AS2A6NEH8 195 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 TRDCB7Z8K6 153 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 SS18L1O75177 396 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-212ENST00000541284 ACP1P24666 158 aa8.2□□□□□ -1.1
CNOT4-212ENST00000541284 HTR5AP47898 357 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms