RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SLC33A1O00400 549 aaPredicted RBP7.64□□□□□ -1.19
DDB1-217ENST00000540166 HSD11B1P28845 292 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 SLC25A1P53007 311 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 SRSF6Q13247 344 aaKnown RBP7.64□□□□□ -1.19
DDB1-217ENST00000540166 ABLIM2Q6H8Q1 611 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 ZNF880Q6PDB4 577 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 DNM1P34Q6PK57 102 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 KCNG3Q8TAE7 436 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 C22orf15Q8WYQ4 148 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 PPP1R14AQ96A00 147 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 MS4A10Q96PG2 267 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 OR8B4Q96RC9 309 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 TXN2Q99757 166 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 GPR27Q9NS67 375 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 CEP192Q8TEP8 1941 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 KIF26BQ2KJY2 2108 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 A1L4Q6 167 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 AQP7O14520 342 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 PNPP00491 289 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 HPNP05981 417 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 LINC00614P0C842 121 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 MPZP25189 248 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 PEBP1P30086 187 aaKnown RBP7.64□□□□□ -1.19
DDB1-217ENST00000540166 P2RY1P47900 373 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 GLIPR1P48060 266 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 CPEB2Q7Z5Q1 589 aaKnown RBP7.64□□□□□ -1.19
DDB1-217ENST00000540166 HOGA1Q86XE5 327 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 C11orf42Q8N5U0 333 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 TMEM217Q8N7C4 229 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 APCDD1LQ8NCL9 501 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 STT3BQ8TCJ2 826 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 ZNRF4Q8WWF5 429 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 MENTQ9BUN1 341 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 SAMD10Q9BYL1 202 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 MRPS28Q9Y2Q9 187 aaKnown RBP7.64□□□□□ -1.19
DDB1-217ENST00000540166 MDC1Q14676 2089 aaKnown RBP7.64□□□□□ -1.19
DDB1-217ENST00000540166 PTPN13Q12923 2485 aa7.64□□□□□ -1.19
DDB1-217ENST00000540166 LY6G6EA0A0G2JKS1 128 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 OR5H8P0DN80 308 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 GUCA1AP43080 201 aaPredicted RBP7.63□□□□□ -1.19
DDB1-217ENST00000540166 HERV-K104P61576 105 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 HGFACQ04756 655 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 ANKRD55Q3KP44 614 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 GLIPR1L1Q6UWM5 242 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 GFRALQ6UXV0 394 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 PRR22Q8IZ63 422 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 OR4D6Q8NGJ1 314 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 OTOSQ8NHW6 89 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 SPACA5Q96QH8 159 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 HIST1H2AAQ96QV6 131 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 ICAM5Q9UMF0 924 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 B9D1Q9UPM9 204 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 U3KQA8 63 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 A6NNC1 897 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 DHRS7CA6NNS2 312 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 CEBPZOSA8MTT3 80 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 SLC35E2P0CK97 266 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 IL12BP29460 328 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 HIST1H3AP68431 136 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 PNRC1Q12796 327 aaPredicted RBP7.63□□□□□ -1.19
DDB1-217ENST00000540166 ZNF74Q16587 644 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 SPIN3Q5JUX0 258 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 COL5A1-AS1Q5SY13 56 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.63□□□□□ -1.19
DDB1-217ENST00000540166 OR4C3Q8NH37 302 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 MCHR2Q969V1 340 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 RBMXL1Q96E39 390 aaKnown RBP7.63□□□□□ -1.19
DDB1-217ENST00000540166 SCARF2Q96GP6 870 aaPredicted RBP7.63□□□□□ -1.19
DDB1-217ENST00000540166 OR2A5Q96R48 311 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 SNHG12Q9BXW3 62 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 TBL1XR1Q9BZK7 514 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 ZNF160Q9HCG1 818 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 GPR132Q9UNW8 380 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 ANKUB1A6NFN9 424 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 GSTP1P09211 210 aaKnown RBP7.63□□□□□ -1.19
DDB1-217ENST00000540166 EPHA1P21709 976 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 RAB38P57729 211 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 RANP62826 216 aaKnown RBP7.63□□□□□ -1.19
DDB1-217ENST00000540166 ARF1P84077 181 aaKnown RBP7.63□□□□□ -1.19
DDB1-217ENST00000540166 WBP2NLQ6ICG8 309 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 KCNIP4Q6PIL6 250 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 CDC20BQ86Y33 519 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 ZNF440Q8IYI8 595 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 POC1BQ8TC44 478 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 LMF2Q9BU23 707 aaKnown RBP7.63□□□□□ -1.19
DDB1-217ENST00000540166 RIMS4Q9H426 269 aaPredicted RBP7.63□□□□□ -1.19
DDB1-217ENST00000540166 LYRM4Q9HD34 91 aa7.63□□□□□ -1.19
DDB1-217ENST00000540166 DNAJB12Q9NXW2 375 aaKnown RBP7.63□□□□□ -1.19
DDB1-217ENST00000540166 A0A087WWC5 75 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 TRAV17A0A0B4J275 112 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 NGFRP08138 427 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 GZMBP10144 247 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 ZNF708P17019 499 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 OR10J1P30954 320 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 KIR3DL2P43630 455 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 ERVFRD-1P60508 538 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 RND3P61587 244 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 PRICKLE4Q2TBC4 344 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 HIKESHIQ53FT3 197 aa7.62□□□□□ -1.19
DDB1-217ENST00000540166 SLC35E3Q7Z769 313 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms