RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 OR4S1Q8NGB4 309 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 OR5AK2Q8NH90 309 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 CYGBQ8WWM9 190 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 MEGF9Q9H1U4 602 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 C16orf95Q9H693 158 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 HMG20AQ9NP66 347 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 DIMT1Q9UNQ2 313 aaKnown RBP12.14□□□□□ -0.47
RAB40B-202ENST00000538809 SIGLEC9Q9Y336 463 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 ANKRD65E5RJM6 399 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 CHST1O43916 411 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 LALBAP00709 142 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 ARG1P05089 322 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 IGHV1-8P0DP01 117 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 IL18R1Q13478 541 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 CDK5R1Q15078 307 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 CCDC58Q4VC31 144 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 SPIN3Q5JUX0 258 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 OR2G6Q5TZ20 316 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 SLC35E4Q6ICL7 350 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 SAXO1Q8IYX7 474 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 ZNF485Q8NCK3 441 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 SETD9Q8NE22 299 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 PPP1R35Q8TAP8 253 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 FBLIM1Q8WUP2 373 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 ZNF714Q96N38 554 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 COMMD4Q9H0A8 199 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 NEK6Q9HC98 313 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 TCF7L1Q9HCS4 588 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 GSTK1Q9Y2Q3 226 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 SIRT4Q9Y6E7 314 aaPredicted RBP12.13□□□□□ -0.47
RAB40B-202ENST00000538809 HSPE1-MOB4S4R3N1 261 aa12.13□□□□□ -0.47
RAB40B-202ENST00000538809 IRGMA1A4Y4 181 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 ODF3BA8MYP8 253 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 M0QZ24 198 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 TIMM23O14925 209 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 KCNAB3O43448 404 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 SULT1B1O43704 296 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 GNAO1P09471 354 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 GABRA5P31644 462 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 OR3A1P47881 315 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 DYNC1I2Q13409 638 aaKnown RBP12.12□□□□□ -0.47
RAB40B-202ENST00000538809 LDLRAD2Q5SZI1 272 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 RPL22L1Q6P5R6 122 aaKnown RBP12.12□□□□□ -0.47
RAB40B-202ENST00000538809 SERPINA12Q8IW75 414 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 OR5D14Q8NGL3 314 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 OR13D1Q8NGV5 346 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 TSEN15Q8WW01 171 aaKnown RBP12.12□□□□□ -0.47
RAB40B-202ENST00000538809 GGHQ92820 318 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 RHOFQ9HBH0 211 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 CLEC2DQ9UHP7 191 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 DHDHQ9UQ10 334 aa12.12□□□□□ -0.47
RAB40B-202ENST00000538809 EXOSC1Q9Y3B2 195 aaKnown RBP12.12□□□□□ -0.47
RAB40B-202ENST00000538809 hADV38S2A0JD32 116 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 OGG1O15527 345 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 TSPAN15O95858 294 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 OR2H2O95918 312 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 RBP4P02753 201 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 HCKP08631 526 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 LMO1P25800 156 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 CAPGP40121 348 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 MEF2CQ06413 473 aaPredicted RBP12.11□□□□□ -0.47
RAB40B-202ENST00000538809 KISS1Q15726 138 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 FAM189A2Q15884 450 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 ZNF626Q68DY1 528 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 HIST2H2BDQ6DRA6 164 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 TRAPPC6BQ86SZ2 158 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 OR52N1Q8NH53 320 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 PIFOQ8TCI5 191 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 NKX3-1Q99801 234 aaPredicted RBP12.11□□□□□ -0.47
RAB40B-202ENST00000538809 EXOSC4Q9NPD3 245 aaKnown RBP12.11□□□□□ -0.47
RAB40B-202ENST00000538809 LINC00312Q9Y6C7 94 aa12.11□□□□□ -0.47
RAB40B-202ENST00000538809 MEGF11A6BM72 1044 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 FAM90A8PA6NJQ4 464 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 MGST3O14880 152 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 MMP23AO75900 390 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 JUNBP17275 347 aaPredicted RBP12.1□□□□□ -0.47
RAB40B-202ENST00000538809 ERP29P30040 261 aaKnown RBP12.1□□□□□ -0.47
RAB40B-202ENST00000538809 RAB13P51153 203 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 SCN1BQ07699 218 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 SSX2Q16385 188 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 AANATQ16613 207 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 Q6P435 159 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 BAIAP2L2Q6UXY1 529 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 TMPRSS11AQ6ZMR5 421 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 OR51A2Q8NGJ7 313 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 OR4C13Q8NGP0 309 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 FOXRED1Q96CU9 486 aaPredicted RBP12.1□□□□□ -0.47
RAB40B-202ENST00000538809 SMIM19Q96E16 107 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 TMEM80Q96HE8 168 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 BABAM2Q9NXR7 383 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 ING3Q9NXR8 418 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 GLS2Q9UI32 602 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 TBL2Q9Y4P3 447 aaKnown RBP12.1□□□□□ -0.47
RAB40B-202ENST00000538809 SESN1Q9Y6P5 492 aa12.1□□□□□ -0.47
RAB40B-202ENST00000538809 IGHV2-26A0A0B4J1V2 119 aa12.09□□□□□ -0.47
RAB40B-202ENST00000538809 FAM172BPA6NC97 362 aa12.09□□□□□ -0.47
RAB40B-202ENST00000538809 SH2D1BO14796 132 aa12.09□□□□□ -0.47
RAB40B-202ENST00000538809 PLXNB1O43157 2135 aa12.09□□□□□ -0.47
RAB40B-202ENST00000538809 TMEM225BP0DP42 221 aa12.09□□□□□ -0.47
RAB40B-202ENST00000538809 ZNF44P15621 663 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms