RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 CYB5AP00167 134 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 IGHG2P01859 326 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 HMGN1P05114 100 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 RPLP1P05386 114 aaKnown RBP8.39□□□□□ -1.07
CTNND1-235ENST00000533189 MRPL3P09001 348 aaKnown RBP8.39□□□□□ -1.07
CTNND1-235ENST00000533189 FAM90A15PP0C7V4 464 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 FAM90A13PP0C7W8 464 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 FAM90A14PP0C7W9 464 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 FAM90A24PP0C7X0 464 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 DUSP1P28562 367 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 PRDX6P30041 224 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 OR3A1P47881 315 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 FUT6P51993 359 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 ROM1Q03395 351 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 APOFQ13790 326 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 HNF4GQ14541 408 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 GINS1Q14691 196 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 PNLIPRP3Q17RR3 467 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 SLC25A26Q70HW3 274 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 OVCH2Q7RTZ1 564 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 DRAM1Q8N682 238 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 OR10G2Q8NGC3 310 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 OR56B4Q8NH76 319 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 HRASLS5Q96KN8 279 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 CITED4Q96RK1 184 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 NIPSNAP1Q9BPW8 284 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 GON7Q9BXV9 100 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 IL36RNQ9UBH0 155 aa8.39□□□□□ -1.07
CTNND1-235ENST00000533189 STARD9Q9P2P6 4700 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 A0A1B0GTI1 187 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 AP4M1O00189 453 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 SIRPB1O00241 398 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 PRKACAP17612 351 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 GDNFP39905 211 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 PTGFRP43088 359 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 MAGEA2P43356 314 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 CDX1P47902 265 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-235ENST00000533189 INSL3P51460 131 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 SNU13P55769 128 aaKnown RBP8.38□□□□□ -1.07
CTNND1-235ENST00000533189 CDC42P60953 191 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 ACTR3P61158 418 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 FAM27D1Q5T7N8 215 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 OR2T5Q6IEZ7 315 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 CYP2R1Q6VVX0 501 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 ELMOD2Q8IZ81 293 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 FAM58AQ8N1B3 248 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 BBS1Q8NFJ9 593 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 OR2T29Q8NH02 315 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 OR9G1Q8NH87 305 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 CORO2AQ92828 525 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 BORCS8Q96FH0 119 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 NKX1-2Q9UD57 310 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-235ENST00000533189 OR52A1Q9UKL2 312 aa8.38□□□□□ -1.07
CTNND1-235ENST00000533189 IGKV1-27A0A075B6S5 117 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 TRBV2A0A0J9YWF9 115 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 PRR32B1ATL7 298 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 SH2D1BO14796 132 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 GATBO75879 557 aaKnown RBP8.37□□□□□ -1.07
CTNND1-235ENST00000533189 ELANEP08246 267 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 SLC2A5P22732 501 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 NFYBP25208 207 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 GLIPR1P48060 266 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 AESQ08117 197 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 FOXE3Q13461 319 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 GPR50Q13585 617 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 ZNF146Q15072 292 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 SPIN3Q5JUX0 258 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 ADAMTSL5Q6ZMM2 481 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 PGAM4Q8N0Y7 254 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 GIPC3Q8TF64 312 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 ISOC1Q96CN7 298 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 FEVQ99581 238 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 TEX12Q9BXU0 123 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 CCDC134Q9H6E4 229 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 EXOSC4Q9NPD3 245 aaKnown RBP8.37□□□□□ -1.07
CTNND1-235ENST00000533189 RBFOX1Q9NWB1 397 aaKnown RBP8.37□□□□□ -1.07
CTNND1-235ENST00000533189 COPS3Q9UNS2 423 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 SNX5Q9Y5X3 404 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 R4GMQ9 66 aa8.37□□□□□ -1.07
CTNND1-235ENST00000533189 A0A087X0M5 115 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 A0A1B0GX30 115 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 ODAMA1E959 279 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 ZNF729A6NN14 1252 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-235ENST00000533189 CCRL2O00421 344 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 RRP9O43818 475 aaKnown RBP8.36□□□□□ -1.07
CTNND1-235ENST00000533189 ENTPD6O75354 484 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 SRSF10O75494 262 aaKnown RBP8.36□□□□□ -1.07
CTNND1-235ENST00000533189 SERPINA3P01011 423 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 IGKV1D-33P01593 117 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 IGKV1-33P01594 117 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 FRMD6-AS1P0C7T7 363 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 CALCBP10092 127 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 BCL3P20749 454 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 NPBWR2P48146 333 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 POU3F4P49335 361 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 RAB7AP51149 207 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 UBE2V2Q15819 145 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 ZNF322Q6U7Q0 402 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-235ENST00000533189 PLEKHG7Q6ZR37 379 aa8.36□□□□□ -1.07
CTNND1-235ENST00000533189 Q6ZSR3 168 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms