RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 RNF144BQ7Z419 303 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 TPRX1Q8N7U7 411 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 OR4S1Q8NGB4 309 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 WFDC12Q8WWY7 111 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 AJUBAQ96IF1 538 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 PPA2Q9H2U2 334 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 CHCHD3Q9NX63 227 aaKnown RBP14.01□□□□□ -0.17
PHRF1-204ENST00000532550 FUOMA2VDF0 154 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 OR2H2O95918 312 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 ARG1P05089 322 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 CD2P06729 351 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 IGHV1-8P0DP01 117 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 RAB3AP20336 220 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 SCN1BQ07699 218 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 SRSF4Q08170 494 aaKnown RBP14□□□□□ -0.17
PHRF1-204ENST00000532550 MED21Q13503 144 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 LY6EQ16553 131 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 BRICD5Q6PL45 260 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 GPR148Q8TDV2 347 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 CPNE2Q96FN4 548 aaPredicted RBP14□□□□□ -0.17
PHRF1-204ENST00000532550 C16orf95Q9H693 158 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 BABAM2Q9NXR7 383 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 EXOSC1Q9Y3B2 195 aaKnown RBP14□□□□□ -0.17
PHRF1-204ENST00000532550 LINC00312Q9Y6C7 94 aa14□□□□□ -0.17
PHRF1-204ENST00000532550 TRRAPQ9Y4A5 3859 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 TSPAN9O75954 239 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 ZNF44P15621 663 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 LMO1P25800 156 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 PAX6P26367 422 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 ERP29P30040 261 aaKnown RBP13.99□□□□□ -0.17
PHRF1-204ENST00000532550 OR3A1P47881 315 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 SOX2P48431 317 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 ADARB1P78563 741 aaKnown RBP13.99□□□□□ -0.17
PHRF1-204ENST00000532550 DYNC1I2Q13409 638 aaKnown RBP13.99□□□□□ -0.17
PHRF1-204ENST00000532550 OR2G6Q5TZ20 316 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 LHFPL4Q7Z7J7 247 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 TRAPPC6BQ86SZ2 158 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 SATL1Q86VE3 508 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 MALSU1Q96EH3 234 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 TMEM80Q96HE8 168 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 GPER1Q99527 375 aa13.99□□□□□ -0.17
PHRF1-204ENST00000532550 DIMT1Q9UNQ2 313 aaKnown RBP13.99□□□□□ -0.17
PHRF1-204ENST00000532550 TBL2Q9Y4P3 447 aaKnown RBP13.99□□□□□ -0.17
PHRF1-204ENST00000532550 FAM90A8PA6NJQ4 464 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 DEGS1O15121 323 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 CLPXO76031 633 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 P2RX3P56373 397 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 IL18R1Q13478 541 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 CDK5R1Q15078 307 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 XAF1Q6GPH4 301 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 SLC35E4Q6ICL7 350 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 CRIP3Q6Q6R5 217 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 OR11H6Q8NGC7 330 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 CITED1Q99966 193 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 RAB18Q9NP72 206 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 UBE2J1Q9Y385 318 aaPredicted RBP13.98□□□□□ -0.17
PHRF1-204ENST00000532550 HSPE1-MOB4S4R3N1 261 aa13.98□□□□□ -0.17
PHRF1-204ENST00000532550 PKD1L1Q8TDX9 2849 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 TRGV10A0A0A0MS01 117 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 A0A0G2JK05 382 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 OGG1O15527 345 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 MTNR1BP49286 362 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 PROK1P58294 105 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 ZP1P60852 638 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 AESQ08117 197 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 ZNF626Q68DY1 528 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 TREML4Q6UXN2 200 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 TCF23Q7RTU1 214 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 CHST4Q8NCG5 386 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 GGHQ92820 318 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 FOXRED1Q96CU9 486 aaPredicted RBP13.97□□□□□ -0.17
PHRF1-204ENST00000532550 NR1H4Q96RI1 486 aaPredicted RBP13.97□□□□□ -0.17
PHRF1-204ENST00000532550 ABCB10Q9NRK6 738 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 CLEC2DQ9UHP7 191 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 ZNF281Q9Y2X9 895 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 SESN1Q9Y6P5 492 aa13.97□□□□□ -0.17
PHRF1-204ENST00000532550 ODF3BA8MYP8 253 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 TIMM23O14925 209 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 CAPGP40121 348 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 ST3GAL4Q11206 333 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 FAM189A2Q15884 450 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 SSX2Q16385 188 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 ZNF529Q6P280 563 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 Q6P435 159 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 C8orf59Q8N0T1 100 aaPredicted RBP13.96□□□□□ -0.17
PHRF1-204ENST00000532550 PXT1Q8NFP0 134 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 TNFAIP8L1Q8WVP5 186 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 RGP1Q92546 391 aaPredicted RBP13.96□□□□□ -0.17
PHRF1-204ENST00000532550 TMEM106AQ96A25 262 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 TMEM133Q9H2Q1 129 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 GAL3ST2Q9H3Q3 398 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 TCF7L1Q9HCS4 588 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 TAS2R4Q9NYW5 299 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 FBLN5Q9UBX5 448 aa13.96□□□□□ -0.17
PHRF1-204ENST00000532550 SIRT4Q9Y6E7 314 aaPredicted RBP13.96□□□□□ -0.17
PHRF1-204ENST00000532550 EFCAB10A6NFE3 127 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 VGLL3A8MV65 326 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 M0QZ24 198 aa13.95□□□□□ -0.18
PHRF1-204ENST00000532550 SLC33A1O00400 549 aaPredicted RBP13.95□□□□□ -0.18
PHRF1-204ENST00000532550 ALDOBP05062 364 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms