RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 F2RL1P55085 397 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 RAB5BP61020 215 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 ARG2P78540 354 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 MFAP5Q13361 173 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 PLPPR5Q32ZL2 321 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 THEM4Q5T1C6 240 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 RPUSD3Q6P087 351 aaKnown RBP6.78□□□□□ -1.32
SPIDR-223ENST00000524033 DHRS11Q6UWP2 260 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 Q6ZRG5 221 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 LANCL3Q6ZV70 420 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 DOK3Q7L591 496 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 TMEM200AQ86VY9 491 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 FAM219AQ8IW50 185 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 ZNF101Q8IZC7 436 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 HPSE2Q8WWQ2 592 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 HAS2Q92819 552 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 DDIT4LQ96D03 193 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 KIRREL1Q96J84 757 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 LYZL4Q96KX0 146 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 YPEL4Q96NS1 127 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 URM1Q9BTM9 101 aaKnown RBP6.78□□□□□ -1.32
SPIDR-223ENST00000524033 ZNF700Q9H0M5 742 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 OR10A2Q9H208 303 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 HRH4Q9H3N8 390 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 BANF2Q9H503 90 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 C11orf1Q9H5F2 150 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 TAF9BQ9HBM6 251 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 GPR84Q9NQS5 396 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 PLA2G3Q9NZ20 509 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 RPH3AQ9Y2J0 694 aaPredicted RBP6.78□□□□□ -1.32
SPIDR-223ENST00000524033 MEMO1Q9Y316 297 aa6.78□□□□□ -1.32
SPIDR-223ENST00000524033 DCHS2Q6V1P9 2916 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 IGHV1-45A0A0A0MS14 117 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 TRAV17A0A0B4J275 112 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 LOC102725191A0A1B0GVB3 256 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 SERPINE3A8MV23 424 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 FARS2O95363 451 aaKnown RBP6.77□□□□□ -1.33
SPIDR-223ENST00000524033 IGHV2-5P01817 119 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 OR8U9P0C7N5 309 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 COX6A1P12074 109 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 ZNF43P17038 809 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 GLRA1P23415 457 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 RPL12P30050 165 aaKnown RBP6.77□□□□□ -1.33
SPIDR-223ENST00000524033 OTX1P32242 354 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-223ENST00000524033 TNFSF10P50591 281 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 SNU13P55769 128 aaKnown RBP6.77□□□□□ -1.33
SPIDR-223ENST00000524033 GRB2P62993 217 aaKnown RBP6.77□□□□□ -1.33
SPIDR-223ENST00000524033 HIST1H3AP68431 136 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 C17orf67Q0P5P2 114 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 ARL6IP1Q15041 203 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 HIST2H3PS2Q5TEC6 136 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 RTL6Q6ICC9 239 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 OR2A2Q6IF42 318 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 FAM180AQ6UWF9 173 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 HIST2H3AQ71DI3 136 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 LRTM2Q8N967 370 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 UBAC2Q8NBM4 344 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 APCDD1LQ8NCL9 501 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 CCDC54Q8NEL0 328 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 OR8U1Q8NH10 309 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 OR6X1Q8NH79 312 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 PSMF1Q92530 271 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 TMEM41AQ96HV5 264 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 MRGPRX4Q96LA9 322 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 SPACA5Q96QH8 159 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 GINS3Q9BRX5 216 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 PLEKHA2Q9HB19 425 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 C1orf123Q9NWV4 160 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 EHFQ9NZC4 300 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 PPP4R1LQ9P1A2 415 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 METTL1Q9UBP6 276 aaKnown RBP6.77□□□□□ -1.33
SPIDR-223ENST00000524033 PCSK5Q92824 1860 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 OTOGQ6ZRI0 2925 aa6.77□□□□□ -1.33
SPIDR-223ENST00000524033 IGKV1D-8A0A087WSZ0 117 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 LOC102723996A0A087X1L8 192 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 A0A0U1RQV5 110 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 C5orf63A6NC05 138 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 E9PLN8 166 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 H7C1Q1 480 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 JTBO76095 146 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 F10P00742 488 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 IFNA2P01563 188 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 IGHG1P01857 330 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 GLAP06280 429 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 CELA2AP08217 269 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 SEC11BP0C7V7 166 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 DANCRP0C864 163 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 PI3P19957 117 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 FCGR2CP31995 323 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 SNCAP37840 140 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 FBXW4P57775 412 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 CSNK2A1P68400 391 aaPredicted RBP6.76□□□□□ -1.33
SPIDR-223ENST00000524033 MYBPHQ13203 477 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 ARFRP1Q13795 201 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 TMEM187Q14656 261 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 TSC22D1Q15714 1073 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 NSDHLQ15738 373 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 ABHD17BQ5VST6 288 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 GGNBP1Q5YKI7 109 aa6.76□□□□□ -1.33
SPIDR-223ENST00000524033 SP5Q6BEB4 398 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms