RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 IGFBP7Q16270 282 aa1.98□□□□□ -2.09
PCM1-220ENST00000523896 HADHQ16836 314 aaKnown RBP1.98□□□□□ -2.09
PCM1-220ENST00000523896 OR2T5Q6IEZ7 315 aa1.98□□□□□ -2.09
PCM1-220ENST00000523896 LINC00336Q6ZUF6 198 aa1.98□□□□□ -2.09
PCM1-220ENST00000523896 DRAM1Q8N682 238 aa1.98□□□□□ -2.09
PCM1-220ENST00000523896 OR2T29Q8NH02 315 aa1.98□□□□□ -2.09
PCM1-220ENST00000523896 KLF14Q8TD94 323 aaPredicted RBP1.98□□□□□ -2.09
PCM1-220ENST00000523896 DCAKDQ8WVC6 231 aa1.98□□□□□ -2.09
PCM1-220ENST00000523896 GLT1D1Q96MS3 346 aa1.98□□□□□ -2.09
PCM1-220ENST00000523896 FRMD8P1Q9BZ68 369 aaPredicted RBP1.98□□□□□ -2.09
PCM1-220ENST00000523896 REEP1Q9H902 201 aa1.98□□□□□ -2.09
PCM1-220ENST00000523896 PRSS16Q9NQE7 514 aa1.98□□□□□ -2.09
PCM1-220ENST00000523896 RABL2AQ9UBK7 228 aaPredicted RBP1.98□□□□□ -2.09
PCM1-220ENST00000523896 PEF1Q9UBV8 284 aaKnown RBP1.98□□□□□ -2.09
PCM1-220ENST00000523896 COL5A1P20908 1838 aaPredicted RBP1.98□□□□□ -2.09
PCM1-220ENST00000523896 GOLGA6L7A0A1B0GV03 622 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 ZNF98A6NK75 572 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 M0R1X1 148 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 PSPHP1O15172 72 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 SLC19A2O60779 497 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 PTHP01270 115 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 IGLV2-8P01709 118 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 RNASE2P10153 161 aaKnown RBP1.97□□□□□ -2.09
PCM1-220ENST00000523896 CYBAP13498 195 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 DAOAP59103 153 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 ATP6V0D1P61421 351 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 KLHL40Q2TBA0 621 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 C6orf99Q4VX62 202 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 TPRG1LQ5T0D9 272 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 TMEM236Q5W0B7 351 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 STEAP4Q687X5 459 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 ULK3Q6PHR2 472 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 DEGS2Q6QHC5 323 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 KIF2BQ8N4N8 673 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 TRAM1L1Q8N609 369 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 ISOC2Q96AB3 205 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 ZFP3Q96NJ6 502 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 RDH12Q96NR8 316 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 SFXN3Q9BWM7 321 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 DDX18Q9NVP1 670 aaKnown RBP1.97□□□□□ -2.09
PCM1-220ENST00000523896 DDX19BQ9UMR2 479 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 FARSAQ9Y285 508 aaKnown RBP1.97□□□□□ -2.09
PCM1-220ENST00000523896 SIGLEC7Q9Y286 467 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 RHBDD3Q9Y3P4 386 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 OR51B2Q9Y5P1 312 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 HIVEP1P15822 2718 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 ANKRD36CQ5JPF3 1778 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 UBR2Q8IWV8 1755 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 GREB1Q4ZG55 1949 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 MIA3Q5JRA6 1907 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 NLRC5Q86WI3 1866 aa1.97□□□□□ -2.09
PCM1-220ENST00000523896 COL4A1P02462 1669 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 NUP98P52948 1817 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 CELSR2Q9HCU4 2923 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 SPENQ96T58 3664 aaKnown RBP1.96□□□□□ -2.1
PCM1-220ENST00000523896 A0A0B4J2E0 115 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 CENPBD1B2RD01 187 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 LINC01619G3V211 115 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 H3BN98 237 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 MANBAO00462 879 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 RPN2P04844 631 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 NTF3P20783 257 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 PRKACBP22694 351 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 TUBG1P23258 451 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 CXCR1P25024 350 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 MPV17P39210 176 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 ERFP50548 548 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 YWHAEP62258 255 aaKnown RBP1.96□□□□□ -2.1
PCM1-220ENST00000523896 HIKESHIQ53FT3 197 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 TTC19Q6DKK2 380 aaPredicted RBP1.96□□□□□ -2.1
PCM1-220ENST00000523896 Q6ZSR6 202 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 NDUFAF7Q7L592 441 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 MRPL21Q7Z2W9 205 aaKnown RBP1.96□□□□□ -2.1
PCM1-220ENST00000523896 SLC30A8Q8IWU4 369 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 OR2Z1Q8NG97 314 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 WDR34Q96EX3 536 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 CERS2Q96G23 380 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 SMARCD1Q96GM5 515 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 ZBED3Q96IU2 234 aaPredicted RBP1.96□□□□□ -2.1
PCM1-220ENST00000523896 UBE2E2Q96LR5 201 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 IL22Q9GZX6 179 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 NAA50Q9GZZ1 169 aaKnown RBP1.96□□□□□ -2.1
PCM1-220ENST00000523896 BLZF1Q9H2G9 400 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 PRORYQ9H606 182 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 TDRD3Q9H7E2 651 aaKnown RBP1.96□□□□□ -2.1
PCM1-220ENST00000523896 CSNK1G1Q9HCP0 422 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 FBXO8Q9NRD0 319 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 TUBG2Q9NRH3 451 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 CES1P1Q9UKY3 287 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 SDK1Q7Z5N4 2213 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 NBASA2RRP1 2371 aa1.96□□□□□ -2.1
PCM1-220ENST00000523896 PTPRSQ13332 1948 aa1.95□□□□□ -2.1
PCM1-220ENST00000523896 ATG2AQ2TAZ0 1938 aa1.95□□□□□ -2.1
PCM1-220ENST00000523896 GOLGA8JA6NMD2 632 aa1.95□□□□□ -2.1
PCM1-220ENST00000523896 C16orf90A8MZG2 172 aa1.95□□□□□ -2.1
PCM1-220ENST00000523896 OR7C2O60412 319 aa1.95□□□□□ -2.1
PCM1-220ENST00000523896 UPK1BO75841 260 aa1.95□□□□□ -2.1
PCM1-220ENST00000523896 SCO1O75880 301 aa1.95□□□□□ -2.1
PCM1-220ENST00000523896 GOLGA8HP0CJ92 632 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms