RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ZNF630Q2M218 657 aaPredicted RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 TBC1D28Q2M2D7 210 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 PYCR3Q53H96 274 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 CST9Q5W186 159 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 FAM71E1Q6IPT2 247 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 MED27Q6P2C8 311 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 C4orf22Q6V702 233 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 RNF165Q6ZSG1 346 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 SLC25A48Q6ZT89 311 aaKnown RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 GALNT10Q86SR1 603 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 KIR2DL5AQ8N109 375 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 OR6V1Q8N148 313 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 MS4A15Q8N5U1 240 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 OR8G5Q8NG78 346 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 OR4M2Q8NGB6 313 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 OR52H1Q8NGJ2 320 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 OR2AE1Q8NHA4 323 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 KIR2DL5BQ8NHK3 375 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 PYROXD1Q8WU10 500 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 EEF1AKMT1Q8WVE0 214 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 C1orf54Q8WWF1 131 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 UFD1Q92890 307 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 TMBIM1Q969X1 311 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 SEC22AQ96IW7 307 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 FAM210BQ96KR6 192 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 VAT1Q99536 393 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 HOPXQ9BPY8 73 aaPredicted RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 CMSS1Q9BQ75 279 aaKnown RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 NRIP2Q9BQI9 281 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF442Q9H7R0 627 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 RETNQ9HD89 108 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 FGF20Q9NP95 211 aaPredicted RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 ISYNA1Q9NPH2 558 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 DDIT4Q9NX09 232 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 FAM206AQ9NX38 181 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 GSKIPQ9P0R6 139 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 RWDD2AQ9UIY3 292 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 GOLT1BQ9Y3E0 138 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 RGPD3A6NKT7 1758 aaPredicted RBP2.4□□□□□ -2.03
VPS13B-207ENST00000518569 RGPD4Q7Z3J3 1758 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 THSD7AQ9UPZ6 1657 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 WNK3Q9BYP7 1800 aa2.4□□□□□ -2.03
VPS13B-207ENST00000518569 MYOM2P54296 1465 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 CCDC141Q6ZP82 1450 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 NRXN3Q9Y4C0 1643 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 LRRK1Q38SD2 2015 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ARHGEF10O15013 1369 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 PLEKHH1Q9ULM0 1364 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 IGHV1OR21-1A0A087WYE8 117 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 UQCRHLA0A096LP55 91 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 A0A0B4J2E0 115 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 PVALEFA0A1B0GWK0 134 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 A0A1B0GX12 115 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 DAPL1A0PJW8 107 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 IDSB3KWA1 339 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ATP6V1G2-DDX39BF2Z307 99 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 LOC110117498-PIK3R3F6TDL0 507 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 KRTAP4-16G5E9R7 235 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 GFYI3L273 518 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 K7EN84 100 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 SLC17A3O00476 420 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ZNF593O00488 134 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 PHYHO14832 338 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 FGF16O43320 207 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ERI3O43414 337 aaKnown RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 MPZL2O60487 215 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 PLIN3O60664 434 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 CLDN11O75508 207 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 EEDO75530 441 aaKnown RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 SOX14O95416 240 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 GCGP01275 180 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 IFNA1P01562 189 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 TYMSP04818 313 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 FGF1P05230 155 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 UQCRHP07919 91 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 CST2P09228 141 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 GIPP09681 153 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ICAM2P13598 275 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ADRB3P13945 408 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ALOX5APP20292 161 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 RAB5AP20339 215 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 HIST1H1TP22492 207 aaPredicted RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 PSMB9P28065 219 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ERP29P30040 261 aaKnown RBP2.39□□□□□ -2.03
VPS13B-207ENST00000518569 SDC4P31431 198 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 CA5AP35218 305 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 NBL1P41271 181 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 TFPI2P48307 235 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ERFP50548 548 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 CRISP1P54107 249 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 BIDP55957 195 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM33P57088 247 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 TAS2R31P59538 309 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 RAP1BP61224 184 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ARG2P78540 354 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 CD164Q04900 197 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 ECH1Q13011 328 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 OR5I1Q13606 314 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 GINS1Q14691 196 aa2.39□□□□□ -2.03
VPS13B-207ENST00000518569 OXA1LQ15070 435 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms