RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 OR2A2Q6IF42 318 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 LEG1Q6P5S2 330 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 UNQ6126/PRO20091Q6UXV3 157 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 OR4N5Q8IXE1 308 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 ZFP82Q8N141 532 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 OR56B1Q8NGI3 324 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 OR51L1Q8NGJ5 315 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 Q8WTZ3 238 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 ERGIC1Q969X5 290 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 SLC25A36Q96CQ1 311 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 MSI2Q96DH6 328 aaKnown RBP6.4□□□□□ -1.38
CLIP1-205ENST00000514271 NGBQ9NPG2 151 aa6.4□□□□□ -1.38
CLIP1-205ENST00000514271 CNOT1A5YKK6 2376 aaKnown RBP6.4□□□□□ -1.38
CLIP1-205ENST00000514271 IGKV1D-43A0A0B4J1Z2 117 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 MDKP21741 143 aaPredicted RBP6.4□□□□□ -1.39
CLIP1-205ENST00000514271 CPT2P23786 658 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 HRH1P35367 487 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 RAB1AP62820 205 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 CYCSP99999 105 aaKnown RBP6.4□□□□□ -1.39
CLIP1-205ENST00000514271 ID2Q02363 134 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 EXOSC7Q15024 291 aaKnown RBP6.4□□□□□ -1.39
CLIP1-205ENST00000514271 SGCBQ16585 318 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 RSPO1Q2MKA7 263 aaPredicted RBP6.4□□□□□ -1.39
CLIP1-205ENST00000514271 ATP1A1-AS1Q5TC04 95 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 WBP2NLQ6ICG8 309 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 GTPBP8Q8N3Z3 284 aaPredicted RBP6.4□□□□□ -1.39
CLIP1-205ENST00000514271 OR52N5Q8NH56 324 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 GAL3ST4Q96RP7 486 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 PIGQQ9BRB3 760 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 TTTY10Q9BZA0 68 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 PTGES2Q9H7Z7 377 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 SLC22A13Q9Y226 551 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 CFAP54Q96N23 3096 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 IGHV3-20A0A0C4DH32 117 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 LIPT2A6NK58 231 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 SGCEO43556 437 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 OR2J2O76002 312 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 IGHG3P01860 377 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 AQP2P41181 271 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 P2RY1P47900 373 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 HAGHQ16775 308 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 SPNS3Q6ZMD2 512 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 OR10R2Q8NGX6 335 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 ADAT3Q96EY9 351 aaPredicted RBP6.4□□□□□ -1.39
CLIP1-205ENST00000514271 SOX7Q9BT81 388 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 B3GAT1Q9P2W7 334 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 V9GYS6 101 aa6.4□□□□□ -1.39
CLIP1-205ENST00000514271 IGKV1D-8A0A087WSZ0 117 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 KIR2DL5BA0A0G2JN68 375 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 KIR2DL5BA0A0G2JPC4 375 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 SCDO00767 359 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 PLPP3O14495 311 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 NEURL1O76050 574 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 TGFAP01135 160 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 MAS1P04201 325 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 HPNP05981 417 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 CHRM2P08172 466 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 SRP19P09132 144 aaKnown RBP6.39□□□□□ -1.39
CLIP1-205ENST00000514271 PRKAG1P54619 331 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 RAB5BP61020 215 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 TMEM187Q14656 261 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 SRSF7Q16629 238 aaKnown RBP eCLIP6.39□□□□□ -1.39
CLIP1-205ENST00000514271 KIR2DL5AQ8N109 375 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 SECTM1Q8WVN6 248 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 ASB10Q8WXI3 467 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 RNF125Q96EQ8 232 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 INTS14Q96SY0 518 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 AGMATQ9BSE5 352 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 NXF5Q9H1B4 397 aaKnown RBP6.39□□□□□ -1.39
CLIP1-205ENST00000514271 TMEM231Q9H6L2 316 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 RPH3ALQ9UNE2 315 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 TMEM14AQ9Y6G1 99 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 TRBV24-1A0A075B6N3 115 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 TMEM235A6NFC5 223 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 ELOA3DA6NLF2 546 aaPredicted RBP6.39□□□□□ -1.39
CLIP1-205ENST00000514271 AQP7O14520 342 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 CTLA4P16410 223 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 SRD5A2P31213 254 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 RAB32Q13637 225 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 ICAM4Q14773 271 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 NDUFAF6Q330K2 333 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 ACTBL2Q562R1 376 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 ZNF506Q5JVG8 444 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 GLYATL3Q5SZD4 288 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 FAM69BQ5VUD6 431 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 FAM90A2PQ658T7 463 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 ZNF324BQ6AW86 544 aaPredicted RBP6.39□□□□□ -1.39
CLIP1-205ENST00000514271 OR2M7Q8NG81 312 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 OR4K15Q8NH41 348 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 CPT1CQ8TCG5 803 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 FBXO17Q96EF6 278 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 ABHD6Q9BV23 337 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 CLEC5AQ9NY25 188 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 CHCHD2Q9Y6H1 151 aaPredicted RBP6.39□□□□□ -1.39
CLIP1-205ENST00000514271 MUC3AQ02505 3323 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 SPEGQ15772 3267 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 GTF3C1Q12789 2109 aa6.39□□□□□ -1.39
CLIP1-205ENST00000514271 LAMA1P25391 3075 aa6.38□□□□□ -1.39
CLIP1-205ENST00000514271 ELOA3CA0A087WX78 387 aaPredicted RBP6.38□□□□□ -1.39
CLIP1-205ENST00000514271 GJE1A6NN92 205 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms