RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 OR7C1O76099 320 aaPredicted RBP10.47□□□□□ -0.73
PDPN-210ENST00000513143 GYPAP02724 150 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 GABRR1P24046 479 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 LMO1P25800 156 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 TNFSF8P32971 234 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 S100A5P33763 92 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 GPR6P46095 362 aaPredicted RBP10.47□□□□□ -0.73
PDPN-210ENST00000513143 PITPNBP48739 271 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 TMEM50BP56557 158 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 DSCR9P59020 149 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 IKZF1Q13422 519 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 PDCD1Q15116 288 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 MOGAT2Q3SYC2 334 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 TMEM155Q4W5P6 130 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 RAB12Q6IQ22 244 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 METAP1DQ6UB28 335 aaPredicted RBP10.47□□□□□ -0.73
PDPN-210ENST00000513143 CLEC2AQ6UVW9 174 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 ZNF788Q6ZQV5 615 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 MUC20Q8N307 709 aaPredicted RBP10.47□□□□□ -0.73
PDPN-210ENST00000513143 CHST4Q8NCG5 386 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 C10orf105Q8TEF2 133 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 FAM168AQ92567 244 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 SDSLQ96GA7 329 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 NUDT16L1Q9BRJ7 211 aaKnown RBP10.47□□□□□ -0.73
PDPN-210ENST00000513143 TMEM246Q9BRR3 403 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 DNTTIP1Q9H147 329 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 DIABLOQ9NR28 239 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 RCC2Q9P258 522 aaKnown RBP10.47□□□□□ -0.73
PDPN-210ENST00000513143 PDZD2O15018 2839 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 TRAV24A0A0B4J272 114 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 FAM25AB3EWG3 89 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 FAM25CB3EWG5 89 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 FAM25GB3EWG6 89 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 SLC33A1O00400 549 aaPredicted RBP10.46□□□□□ -0.73
PDPN-210ENST00000513143 LCE2BO14633 110 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 XRCC3O43542 346 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 OR2H2O95918 312 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 TFF1P04155 84 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 ZNF44P15621 663 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 CDK2P24941 298 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 CHATP28329 748 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 BLVRBP30043 206 aaPredicted RBP10.46□□□□□ -0.73
PDPN-210ENST00000513143 GABRA2P47869 451 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 CEBPDP49716 269 aaPredicted RBP10.46□□□□□ -0.73
PDPN-210ENST00000513143 SCN1BQ07699 218 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 AVPI1Q5T686 147 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 DCDC5Q6ZRR9 648 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 LINC00299Q6ZSB3 139 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 ZNF561Q8N587 486 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 OR10R2Q8NGX6 335 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 PHF21AQ96BD5 680 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 ZNF665Q9H7R5 613 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 SPACA1Q9HBV2 294 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 KAAG1Q9UBP8 84 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 EXTL2Q9UBQ6 330 aa10.46□□□□□ -0.73
PDPN-210ENST00000513143 ISPDA4D126 451 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 VWC2LB2RUY7 222 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 SIGLEC5O15389 551 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 PDCD6O75340 191 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 GLAP06280 429 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 FUT3P21217 361 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 COL10A1Q03692 680 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 PLAC9Q5JTB6 97 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 ATAD3CQ5T2N8 411 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 CNIH2Q6PI25 160 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 PRSS57Q6UWY2 283 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 C17orf107Q6ZR85 190 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 Q6ZTK2 550 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 SUMF2Q8NBJ7 301 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 OR4M1Q8NGD0 313 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 RAB3CQ96E17 227 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 MED30Q96HR3 178 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 DIRAS2Q96HU8 199 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 GAFA1Q96PS6 74 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 NEDD4LQ96PU5 975 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 CCL13Q99616 98 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 PIMREGQ9BSJ6 248 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 BPESC1Q9GZL8 116 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 HSF4Q9ULV5 492 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 MAB21L2Q9Y586 359 aa10.45□□□□□ -0.74
PDPN-210ENST00000513143 ASH1LQ9NR48 2969 aaKnown RBP10.44□□□□□ -0.74
PDPN-210ENST00000513143 TMEM82A0PJX8 343 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 NKX6-3A6NJ46 265 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 CEACAM18A8MTB9 384 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 SIRPB1O00241 398 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 PSPNO60542 156 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 ZNF737O75373 536 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 TPPPO94811 219 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 HIST1H1DP16402 221 aaKnown RBP10.44□□□□□ -0.74
PDPN-210ENST00000513143 TALDO1P37837 337 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 MNDAP41218 407 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 NR4A2P43354 598 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 IL13RA1P78552 427 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 CLEC12BQ2HXU8 276 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 ZNF260Q3ZCT1 412 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 TMEM69Q5SWH9 247 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 LYPD2Q6UXB3 125 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 SLC36A1Q7Z2H8 476 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 C6orf201Q7Z4U5 140 aa10.44□□□□□ -0.74
PDPN-210ENST00000513143 CCDC190Q86UF4 302 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms