RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 MRPL48Q96GC5 212 aaKnown RBP1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 NUDT9Q9BW91 350 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 GAL3ST2Q9H3Q3 398 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 FBXO6Q9NRD1 293 aaPredicted RBP1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 CA10Q9NS85 328 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 ADA2Q9NZK5 511 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 NDRG2Q9UN36 371 aaKnown RBP1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 LRRC42Q9Y546 428 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 KPTNQ9Y664 436 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 COL5A1P20908 1838 aaPredicted RBP1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 MYO5BQ9ULV0 1848 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 FRYLO94915 3013 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 KIAA0232Q92628 1395 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 PIK3R4Q99570 1358 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 ARHGAP5Q13017 1502 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 SSC5DA1L4H1 1573 aa1.3□□□□□ -2.2
SCAMP1-204ENST00000511551 WDFY3Q8IZQ1 3526 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 LRRC37A2A6NM11 1700 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 KDM3BQ7LBC6 1761 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 ITGB4P16144 1822 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 WNK3Q9BYP7 1800 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 PKD1L1Q8TDX9 2849 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 IGHV6-1A0A0B4J1U7 121 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 DFFAO00273 331 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 MYL12BO14950 172 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 GATCO43716 136 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 GATBO75879 557 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 CDRT1O95170 752 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 SMC2O95347 1197 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 PLEKHA8P1O95397 391 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 RPN2P04844 631 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 SLC35G6P0C7Q6 338 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 STAG3L2P0CL84 134 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 ZNF14P17017 642 aaPredicted RBP1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 PRKACBP22694 351 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 P2RY2P41231 377 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 ERFP50548 548 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 MLF1P58340 268 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 SLC35B1P78383 322 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 PIGHQ14442 188 aaPredicted RBP1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 ATP6V1FQ16864 119 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 HNRNPA1L2Q32P51 320 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 LUZP6Q538Z0 58 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 DNLZQ5SXM8 178 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 KPRPQ5T749 579 aaPredicted RBP1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 PRR9Q5T870 116 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 MLIPQ5VWP3 458 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 Q6ZSR6 202 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 NT5DC3Q86UY8 548 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 SLC30A8Q8IWU4 369 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 STK40Q8N2I9 435 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 ARHGAP18Q8N392 663 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 RNF10Q8N5U6 811 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 LINC00469Q8N7U9 141 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 SLC25A29Q8N8R3 303 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 TMEM104Q8NE00 496 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 OR5M1Q8NGP8 315 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 OR51A7Q8NH64 312 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 OR1S1Q8NH92 325 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 ZFAND1Q8TCF1 268 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 CDS1Q92903 461 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 SNF8Q96H20 258 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 CENPNQ96H22 339 aaPredicted RBP1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 ZFP3Q96NJ6 502 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 ALS2CR12Q96Q35 445 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 TSNAXQ99598 290 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 MAP1LC3CQ9BXW4 147 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 LINC00574Q9H8X3 128 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 IL37Q9NZH6 218 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 TTC21AQ8NDW8 1320 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 FN1P02751 2386 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 CLIP1P30622 1438 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 TLN1Q9Y490 2541 aaKnown RBP1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 NBEAL2Q6ZNJ1 2754 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 TOGARAM1Q9Y4F4 1720 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 LTBP2Q14767 1821 aa1.29□□□□□ -2.2
SCAMP1-204ENST00000511551 CACNA1DQ01668 2161 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 CREBBPQ92793 2442 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 ATRQ13535 2644 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 TRAV8-4A0A0B4J246 113 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 TRAV8-6A0A0B4J262 113 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 ISPDA4D126 451 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 GOLGA8JA6NMD2 632 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 BTNL10A8MVZ5 291 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 A8MWL6 223 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 CENPBD1B2RD01 187 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 J3QT63 122 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 UPK1AO00322 258 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 OR7C2O60412 319 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 ZMPSTE24O75844 475 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 SCO1O75880 301 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 VAPBO95292 243 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 GCGP01275 180 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 IGKV1D-16P01601 117 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 P01737 135 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 MMP7P09237 267 aaPredicted RBP1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 OR5AL1P0C617 328 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 GOLGA8HP0CJ92 632 aa1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 HOXB8P17481 243 aaPredicted RBP1.28□□□□□ -2.2
SCAMP1-204ENST00000511551 PAX6P26367 422 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms