RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SPDL1Q96EA4 605 aa4.51□□□□□ -1.69
USP53-206ENST00000510737 SEH1LQ96EE3 360 aa4.51□□□□□ -1.69
USP53-206ENST00000510737 CCDC28BQ9BUN5 200 aa4.51□□□□□ -1.69
USP53-206ENST00000510737 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
USP53-206ENST00000510737 DPH5Q9H2P9 285 aa4.51□□□□□ -1.69
USP53-206ENST00000510737 WDR76Q9H967 626 aa4.51□□□□□ -1.69
USP53-206ENST00000510737 SLCO1B3Q9NPD5 702 aa4.51□□□□□ -1.69
USP53-206ENST00000510737 C1orf123Q9NWV4 160 aa4.51□□□□□ -1.69
USP53-206ENST00000510737 PITPNC1Q9UKF7 332 aa4.51□□□□□ -1.69
USP53-206ENST00000510737 FIS1Q9Y3D6 152 aa4.51□□□□□ -1.69
USP53-206ENST00000510737 DNAJC15Q9Y5T4 150 aa4.51□□□□□ -1.69
USP53-206ENST00000510737 DMBT1Q9UGM3 2413 aaPredicted RBP4.5□□□□□ -1.69
USP53-206ENST00000510737 PTGES3LE9PB15 166 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 H3BQF6 201 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 AZIN1O14977 448 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 PTP4A3O75365 173 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 TFF1P04155 84 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 IFNA6P05013 189 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 SPNP16150 400 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 SLC6A1P30531 599 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 CHI3L1P36222 383 aaPredicted RBP4.5□□□□□ -1.69
USP53-206ENST00000510737 SSX2Q16385 188 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 HAGHQ16775 308 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 DEFB136Q30KP8 78 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 ABCA11PQ4W5N1 156 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 BEND6Q5SZJ8 279 aaPredicted RBP4.5□□□□□ -1.69
USP53-206ENST00000510737 ULK3Q6PHR2 472 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 BAIAP2L2Q6UXY1 529 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 ZNF695Q8IW36 515 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 SLC30A8Q8IWU4 369 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 LRRC34Q8IZ02 419 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 OR5D13Q8NGL4 314 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 MALSU1Q96EH3 234 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 ATF6BQ99941 703 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 SLC35A5Q9BS91 424 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 C1orf50Q9BV19 199 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 ST6GALNAC5Q9BVH7 336 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 ADA2Q9NZK5 511 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 RPS6KB2Q9UBS0 482 aa4.5□□□□□ -1.69
USP53-206ENST00000510737 APOBP04114 4563 aaKnown RBP4.49□□□□□ -1.69
USP53-206ENST00000510737 IGHV3-38A0A0C4DH36 116 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 TRBV4-1A0A0J9YWV2 114 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 PSMB11A5LHX3 300 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 SRRM4A7MD48 611 aaKnown RBP4.49□□□□□ -1.69
USP53-206ENST00000510737 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.49□□□□□ -1.69
USP53-206ENST00000510737 TPST2O60704 377 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 MT-ATP6P00846 226 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 NEFHP12036 1026 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 COX7A1P24310 79 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 ANP32AP39687 249 aaKnown RBP4.49□□□□□ -1.69
USP53-206ENST00000510737 GSK3BP49841 420 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 DYNLT3P51808 116 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 UGT2B15P54855 530 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 PLTPP55058 493 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 CLDN8P56748 225 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 PCBD1P61457 104 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 ECH1Q13011 328 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 ZNF146Q15072 292 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 DGUOKQ16854 277 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 C6orf136Q5SQH8 315 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 NOXO1Q8NFA2 376 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 OR8J2Q8NGG1 315 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 DNAJA4Q8WW22 397 aaPredicted RBP4.49□□□□□ -1.69
USP53-206ENST00000510737 HDAC2Q92769 488 aaKnown RBP4.49□□□□□ -1.69
USP53-206ENST00000510737 RASD2Q96D21 266 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 ZIM3Q96PE6 472 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 WFDC6Q9BQY6 131 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 ERP44Q9BS26 406 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 DCLRE1BQ9H816 532 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 RETNQ9HD89 108 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 SNX12Q9UMY4 172 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 NDUFAF1Q9Y375 327 aa4.49□□□□□ -1.69
USP53-206ENST00000510737 A0A1W2PQ09 198 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 CENPBD1B2RD01 187 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 CTDSP2O14595 271 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 GLCEO94923 617 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 ASAH2BP0C7U1 165 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 MUC1P15941 1255 aaPredicted RBP4.48□□□□□ -1.69
USP53-206ENST00000510737 BGNP21810 368 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 CD24P25063 80 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 GGT2P36268 569 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 INSL3P51460 131 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 CASP8Q14790 479 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 KIR2DS1Q14954 304 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 OR8G1Q15617 311 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 PCK2Q16822 640 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 MICBQ29980 383 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 RSPO1Q2MKA7 263 aaPredicted RBP4.48□□□□□ -1.69
USP53-206ENST00000510737 LRRC10Q5BKY1 277 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 IGSF11Q5DX21 431 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 ARMC4Q5T2S8 1044 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 FAM27D1Q5T7N8 215 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 RNLSQ5VYX0 342 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 OTPQ5XKR4 325 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 FAM91A1Q658Y4 838 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 SLC36A1Q7Z2H8 476 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 OR5L1Q8NGL2 311 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 OR9Q1Q8NGQ5 310 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 TCP10LQ8TDR4 215 aa4.48□□□□□ -1.69
USP53-206ENST00000510737 ACOT11Q8WXI4 607 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms