RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 MGAQ8IWI9 3026 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 AHCTF1Q8WYP5 2266 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 IGKV3D-15A0A087WSY6 115 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 TRGV5A0A0B4J1U4 118 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 A0A0J9YW62 118 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 A0A1W2PPQ1 181 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 TMEM89A2RUT3 159 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 ZNF726A6NNF4 738 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 ZNF724A8MTY0 619 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 SSX4O60224 188 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 HPGDSO60760 199 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 SC5DO75845 299 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 IGHG1P01857 330 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 MELTFP08582 738 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 CSF3P09919 207 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 UBCP0CG48 685 aaKnown RBP6.1□□□□□ -1.43
CLCN3-206ENST00000507875 PRF1P14222 555 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 LHX2P50458 406 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 SLURP1P55000 103 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 LSM6P62312 80 aaKnown RBP6.1□□□□□ -1.43
CLCN3-206ENST00000507875 SRSF6Q13247 344 aaKnown RBP6.1□□□□□ -1.43
CLCN3-206ENST00000507875 MELKQ14680 651 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 PYDC2Q56P42 97 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 DMKNQ6E0U4 476 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-206ENST00000507875 SYS1Q8N2H4 156 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 OR4A16Q8NH70 328 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 RNASE11Q8TAA1 199 aaKnown RBP6.1□□□□□ -1.43
CLCN3-206ENST00000507875 ASB17Q8WXJ9 295 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 ACOT12Q8WYK0 555 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 RNF183Q96D59 192 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 PGLYRP3Q96LB9 341 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 NMNAT3Q96T66 252 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 SOSTQ9BQB4 213 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 FAM234AQ9H0X4 552 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 B3GAT2Q9NPZ5 323 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 B3GAT1Q9P2W7 334 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 MCTS1Q9ULC4 181 aaKnown RBP6.1□□□□□ -1.43
CLCN3-206ENST00000507875 FREM3P0C091 2139 aa6.1□□□□□ -1.43
CLCN3-206ENST00000507875 TRBV7-9A0A0J9YWB2 115 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 NPIPA3F8WFD2 350 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 G3V3Y1 287 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 C1QL1O75973 258 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 TCRBP04435 133 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 HOXD4P09016 255 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-206ENST00000507875 GZMHP20718 246 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 PYCR1P32322 319 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 TALDO1P37837 337 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 CDKN2AP42771 156 aaKnown RBP6.09□□□□□ -1.43
CLCN3-206ENST00000507875 RFX2P48378 723 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 EVX1P49640 407 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 RAB9AP51151 201 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 AP2S1P53680 142 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-206ENST00000507875 HCCSP53701 268 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 CLDN18P56856 261 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 ASAH1Q13510 395 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 HIST3H3Q16695 136 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 LINC00303Q3SY05 128 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 CNIH2Q6PI25 160 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 CREB3L2Q70SY1 520 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 MRPL21Q7Z2W9 205 aaKnown RBP6.09□□□□□ -1.43
CLCN3-206ENST00000507875 CEACAM19Q7Z692 300 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 NR2C2APQ86WQ0 139 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 MS4A15Q8N5U1 240 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 ZPLD1Q8TCW7 415 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 ZNRF4Q8WWF5 429 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 TMEM54Q969K7 222 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 SARAFQ96BY9 339 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 LINC00470Q9BZP3 86 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 CYSLTR2Q9NS75 346 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 B9D1Q9UPM9 204 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 NUBP2Q9Y5Y2 271 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 DIRC3C9JPN6 131 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 PRSS46E5RG02 174 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 C11orf98E9PRG8 122 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 J3QKU1 62 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 TFECO14948 347 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-206ENST00000507875 SGCEO43556 437 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 TRAF3IP2O43734 574 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-206ENST00000507875 AQP8O94778 261 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 SHC1P29353 583 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 SFTPDP35247 375 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 MAGEA5P43359 124 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 RPL23AP62750 156 aaKnown RBP6.09□□□□□ -1.43
CLCN3-206ENST00000507875 POU3F1Q03052 451 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-206ENST00000507875 SLC17A1Q14916 467 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 TNXAQ16473 311 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 C5orf47Q569G3 176 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 C10orf128Q5T292 105 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 LINC01590Q5TEZ4 76 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 FOXL2NBQ6ZUU3 175 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 CHMP1BQ7LBR1 199 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 TGIF2LXQ8IUE1 241 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 SLC35F2Q8IXU6 374 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 RFLNBQ8N5W9 214 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 NOXO1Q8NFA2 376 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 GHSRQ92847 366 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 PELI1Q96FA3 418 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 NEDD4LQ96PU5 975 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 RNF2Q99496 336 aa6.09□□□□□ -1.43
CLCN3-206ENST00000507875 CSTL1Q9H114 145 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms