RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 RBM14Q96PK6 669 aaKnown RBP16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 MEX3AA1L020 520 aaKnown RBP16.84■□□□□ 0.29
SQSTM1-210ENST00000506042 PTGFRP43088 359 aa16.84■□□□□ 0.29
SQSTM1-210ENST00000506042 TMED1Q13445 227 aa16.84■□□□□ 0.29
SQSTM1-210ENST00000506042 UBE2V2Q15819 145 aa16.84■□□□□ 0.29
SQSTM1-210ENST00000506042 C9orf152Q5JTZ5 239 aa16.84■□□□□ 0.29
SQSTM1-210ENST00000506042 CHST4Q8NCG5 386 aa16.84■□□□□ 0.29
SQSTM1-210ENST00000506042 OR4P4Q8NGL7 312 aa16.84■□□□□ 0.29
SQSTM1-210ENST00000506042 MRPL48Q96GC5 212 aaKnown RBP16.84■□□□□ 0.29
SQSTM1-210ENST00000506042 TMEM82A0PJX8 343 aa16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 PRR32B1ATL7 298 aa16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 G3V2T6 193 aa16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 GP2P55259 537 aaKnown RBP16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 SLC35B1P78383 322 aa16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 AADACL4Q5VUY2 407 aa16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 ZDHHC13Q8IUH4 622 aa16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 TPRX1Q8N7U7 411 aa16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 OR10H4Q8NGA5 316 aa16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 DSCAML1Q8TD84 2053 aa16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 CPNE2Q96FN4 548 aaPredicted RBP16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 TBX5Q99593 518 aa16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 OR6C3Q9NZP0 311 aa16.83■□□□□ 0.28
SQSTM1-210ENST00000506042 LOC107986453A0A1B0GWG9 222 aa16.82■□□□□ 0.28
SQSTM1-210ENST00000506042 PSMB11A5LHX3 300 aa16.82■□□□□ 0.28
SQSTM1-210ENST00000506042 IGHA1P01876 353 aa16.82■□□□□ 0.28
SQSTM1-210ENST00000506042 CDK2P24941 298 aa16.82■□□□□ 0.28
SQSTM1-210ENST00000506042 BNIP1Q12981 228 aa16.82■□□□□ 0.28
SQSTM1-210ENST00000506042 KCTD20Q7Z5Y7 419 aa16.82■□□□□ 0.28
SQSTM1-210ENST00000506042 OSR2Q8N2R0 312 aa16.82■□□□□ 0.28
SQSTM1-210ENST00000506042 IL4I1Q96RQ9 567 aa16.82■□□□□ 0.28
SQSTM1-210ENST00000506042 MOB4Q9Y3A3 225 aa16.82■□□□□ 0.28
SQSTM1-210ENST00000506042 HSPE1-MOB4S4R3N1 261 aa16.82■□□□□ 0.28
SQSTM1-210ENST00000506042 ZNF44P15621 663 aa16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 HTR1FP30939 366 aa16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 UTS2BQ765I0 119 aa16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 COMMD1Q8N668 190 aa16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 ZNF565Q8N9K5 539 aa16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 CHPT1Q8WUD6 406 aa16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 CORO2AQ92828 525 aa16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 RPEQ96AT9 228 aa16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 ZNF649Q9BS31 505 aa16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 RBFOX1Q9NWB1 397 aaKnown RBP16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 GNG8Q9UK08 70 aa16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 GSTK1Q9Y2Q3 226 aa16.81■□□□□ 0.28
SQSTM1-210ENST00000506042 TCRBV3S1A0A5B6 114 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 ZNF729A6NN14 1252 aaPredicted RBP16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 ZAR1LA6NP61 321 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 SIRPB1O00241 398 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 MAGEB4O15481 346 aaPredicted RBP16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 ENTPD6O75354 484 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 CSN2P05814 226 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 BCL3P20749 454 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 CD34P28906 385 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 DAPP51397 102 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 SNU13P55769 128 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 RBM39Q14498 530 aaKnown RBP16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 HLA-DRB5Q30154 266 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 LDLRAD2Q5SZI1 272 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 PRAMEF5Q5TYX0 476 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 C12orf73Q69YU5 71 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 Q6ZS46 218 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 TCF23Q7RTU1 214 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 OR52N4Q8NGI2 321 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 TOMM40LQ969M1 308 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 OPALINQ96PE5 141 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 HMG20AQ9NP66 347 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 ZFP57Q9NU63 452 aa16.8■□□□□ 0.28
SQSTM1-210ENST00000506042 IGKV1-27A0A075B6S5 117 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 A0A1W2PQL4 384 aaPredicted RBP16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 NUDT19A8MXV4 375 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 F8VVB4 439 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 F8VWA3 439 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 H3BSH0 61 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 BUB1B-PAK6H3BSN5 160 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 K7EIL1 84 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 PSPNO60542 156 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 FCGR1AP12314 374 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 ATF1P18846 271 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 DUSP1P28562 367 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 OR3A1P47881 315 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 GYS2P54840 703 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 OR8J1Q8NGP2 316 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 HRASLS5Q96KN8 279 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 WWC2-AS2Q96NR7 200 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 GON7Q9BXV9 100 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 NOTCH3Q9UM47 2321 aa16.79■□□□□ 0.28
SQSTM1-210ENST00000506042 ODAMA1E959 279 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 SNTNA6NMZ2 147 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 OR2H2O95918 312 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 IGLV1-47P01700 117 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 T-ENOLP0DO92 83 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 SCN1BQ07699 218 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 PDZK1IP1Q13113 114 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 KRBOX4Q5JUW0 171 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 TPTE2P1Q5T6R2 138 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 BCDIN3DQ7Z5W3 292 aaKnown RBP16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 FOXRED2Q8IWF2 684 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 SAXO1Q8IYX7 474 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 OR9G1Q8NH87 305 aa16.78■□□□□ 0.28
SQSTM1-210ENST00000506042 BCAS4Q8TDM0 211 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms