RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	GPM6A	P51674	278 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	FUT6	P51993	359 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	GNG3	P63215	75 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	RPP30	P78346	268 aa	Known RBP	6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	ZNF154	Q13106	437 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	TIMM50	Q3ZCQ8	353 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	HSD17B12	Q53GQ0	312 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	PRAMEF6	Q5VXH4	476 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	C22orf42	Q6IC83	251 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	GPR141	Q7Z602	305 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	DNAAF1	Q8NEP3	725 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	OR52N4	Q8NGI2	321 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	OR51A2	Q8NGJ7	313 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	FAM110D	Q8TAY7	271 aa	Predicted RBP	6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	TRMT10A	Q8TBZ6	339 aa	Known RBP	6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	C10orf105	Q8TEF2	133 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	TMIGD2	Q96BF3	282 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	BORCS8	Q96FH0	119 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	CHCHD6	Q9BRQ6	235 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	TM2D2	Q9BX73	214 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	KRTAP9-9	Q9BYP9	154 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	KRTAP9-4	Q9BYQ2	154 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	OR51E2	Q9H255	320 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	PPIL3	Q9H2H8	161 aa	Known RBP	6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	NEK6	Q9HC98	313 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	EXOSC4	Q9NPD3	245 aa	Known RBP	6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	TMEM138	Q9NPI0	162 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	SSR3	Q9UNL2	185 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	FOXJ3	Q9UPW0	622 aa		6.19	□□□□□ -1.42
GARNL3-222	ENST00000498801	VPS13C	Q709C8	3753 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	IGKV1-27	A0A075B6S5	117 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	IGHV1-69-2	A0A0G2JMI3	117 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	LOC100506127	A0A0U1RQW1	187 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	LRP5L	A4QPB2	252 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	MAGEB3	O15480	346 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	AIRE	O43918	545 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	LY6H	O94772	140 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	MAS1	P04201	325 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	ALDOB	P05062	364 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	HCK	P08631	526 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	DAO	P14920	347 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	SRM	P19623	302 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	MYL9	P24844	172 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	CALR	P27797	417 aa	Known RBP	6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	BDKRB2	P30411	391 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	FGF9	P31371	208 aa	Predicted RBP	6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	HAAO	P46952	286 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	RBP2	P50120	134 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	MTCP1	P56278	107 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	LOXL1	Q08397	574 aa	Predicted RBP	6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	MPPED2	Q15777	294 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	CLEC12B	Q2HXU8	276 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	ZNF181	Q2M3W8	571 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	FAM76B	Q5HYJ3	339 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	DDI2	Q5TDH0	399 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	CLEC2A	Q6UVW9	174 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	GDPGP1	Q6ZNW5	385 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	LRRTM1	Q86UE6	522 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	ZNF573	Q86YE8	665 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	ZNF525	Q8N782	197 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	RDH5	Q92781	318 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	RPL3L	Q92901	407 aa	Known RBP	6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	ERGIC1	Q969X5	290 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	CPNE2	Q96FN4	548 aa	Predicted RBP	6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	CENPO	Q9BU64	300 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	FUNDC2	Q9BWH2	189 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	SLITRK2	Q9H156	845 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	TLNRD1	Q9H1K6	362 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	OR51I2	Q9H344	312 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	FN3KRP	Q9HA64	309 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	SNTG1	Q9NSN8	517 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	UFSP2	Q9NUQ7	469 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	C1orf123	Q9NWV4	160 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	TXNL4B	Q9NX01	149 aa	Known RBP	6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	TREM2	Q9NZC2	230 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	PPP1R3C	Q9UQK1	317 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	GSTK1	Q9Y2Q3	226 aa		6.18	□□□□□ -1.42
GARNL3-222	ENST00000498801	USF3	Q68DE3	2245 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	TRAV1-2	A0A0B4J238	106 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	TRIM64B	A6NI03	449 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	LRRC30	A6NM36	301 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	LYNX1	G3V0Z9	82 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801		J3QT63	122 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	IFNL4	K9M1U5	179 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	CDIPT	O14735	213 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	SSX4	O60224	188 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	LYNX1	P0DP58	116 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	IRF2	P14316	349 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	ADRA2C	P18825	462 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	PMEL	P40967	661 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	NR4A2	P43354	598 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	ATP1B3	P54709	279 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	HNRNPA0	Q13151	305 aa	Known RBP	6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	IL13RA2	Q14627	380 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	KISS1	Q15726	138 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	HFE	Q30201	348 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	GPR107	Q5VW38	600 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	HAGHL	Q6PII5	290 aa	Predicted RBP	6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	WDR82	Q6UXN9	313 aa		6.17	□□□□□ -1.42
GARNL3-222	ENST00000498801	SLC16A12	Q6ZSM3	486 aa		6.17	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms