RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 Q8IYB0 196 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 DEFB107AQ8IZN7 70 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 APOL4Q9BPW4 351 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 ELAC2Q9BQ52 826 aaKnown RBP10.99□□□□□ -0.65
CCDC58-207ENST00000498466 TEX12Q9BXU0 123 aa10.99□□□□□ -0.65
CCDC58-207ENST00000498466 SEBOXQ9HB31 216 aaPredicted RBP10.99□□□□□ -0.65
CCDC58-207ENST00000498466 RBFOX1Q9NWB1 397 aaKnown RBP10.99□□□□□ -0.65
CCDC58-207ENST00000498466 DSCAML1Q8TD84 2053 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 SEC14L6B5MCN3 397 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 LY6LH3BQJ8 138 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 H3BSH0 61 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 SIRPB1O00241 398 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 MAGEB4O15481 346 aaPredicted RBP10.98□□□□□ -0.65
CCDC58-207ENST00000498466 CALCBP10092 127 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 LYL1P12980 280 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 OSMP13725 252 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 CD34P28906 385 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 GDNFP39905 211 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 FUT6P51993 359 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 CXCR4P61073 352 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 ACTR3P61158 418 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 CDK5Q00535 292 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 ODF4Q2M2E3 257 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 DEFB136Q30KP8 78 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 SPATS1Q496A3 300 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 TMEM236Q5W0B7 351 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 ZNF322Q6U7Q0 402 aaPredicted RBP10.98□□□□□ -0.65
CCDC58-207ENST00000498466 Q6ZSR3 168 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 SLC35E3Q7Z769 313 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 FOXRED2Q8IWF2 684 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 FAM58AQ8N1B3 248 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 C5orf56Q8N8D9 126 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 OR4D6Q8NGJ1 314 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 OR56B4Q8NH76 319 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 TOMM40LQ969M1 308 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 RPEQ96AT9 228 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 BORCS8Q96FH0 119 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 RCHY1Q96PM5 261 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 TAS2R3Q9NYW6 316 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 SNX5Q9Y5X3 404 aa10.98□□□□□ -0.65
CCDC58-207ENST00000498466 TRBV2A0A0J9YWF9 115 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 LCE6AA0A183 80 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 FUOMA2VDF0 154 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 CCDC182A6NF36 153 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 GATBO75879 557 aaKnown RBP10.97□□□□□ -0.65
CCDC58-207ENST00000498466 LY86O95711 162 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 CYB5AP00167 134 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 TMEM11P17152 192 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 PRKACAP17612 351 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 BCL3P20749 454 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 PTGFRP43088 359 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 NPBWR2P48146 333 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 GK3PQ14409 553 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 HNF4GQ14541 408 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 ZNF146Q15072 292 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 TEX38Q6PEX7 206 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 THNSL2Q86YJ6 484 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 STPG2Q8N412 459 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 OR8U1Q8NH10 309 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 CORO2AQ92828 525 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 CNN2Q99439 309 aaKnown RBP10.97□□□□□ -0.65
CCDC58-207ENST00000498466 DCLRE1BQ9H816 532 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 ZNF556Q9HAH1 456 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 PCDHB16Q9NRJ7 776 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 NDE1Q9NXR1 346 aa10.97□□□□□ -0.65
CCDC58-207ENST00000498466 ZNF256Q9Y2P7 627 aaPredicted RBP10.97□□□□□ -0.65
CCDC58-207ENST00000498466 FAM90A18PA6NE21 464 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 FAM90A16PA6NEW6 464 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 FAM90A20PA6NIJ5 464 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 FAM90A9PA6NNJ1 464 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 FAM90A12PA8MX19 464 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 FAM90A5PA8MXJ8 464 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 FGF16O43320 207 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 SYT7O43581 403 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 ENTPD6O75354 484 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 SERPINA3P01011 423 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 CST1P01037 141 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 RPLP1P05386 114 aaKnown RBP10.96□□□□□ -0.65
CCDC58-207ENST00000498466 FAM90A15PP0C7V4 464 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 FAM90A13PP0C7W8 464 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 FAM90A14PP0C7W9 464 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 FAM90A24PP0C7X0 464 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 CCL1P22362 96 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 NFYBP25208 207 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 GLIPR1P48060 266 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 POU3F4P49335 361 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 CDC42P60953 191 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 AESQ08117 197 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 SPIN3Q5JUX0 258 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 LCNL1Q6ZST4 164 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 DHFR2Q86XF0 187 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 DRAM1Q8N682 238 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 EXOSC4Q9NPD3 245 aaKnown RBP10.96□□□□□ -0.65
CCDC58-207ENST00000498466 ING3Q9NXR8 418 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 TVP23BQ9NYZ1 205 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 TAGLN3Q9UI15 199 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 SCOCQ9UIL1 159 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 GSTK1Q9Y2Q3 226 aa10.96□□□□□ -0.65
CCDC58-207ENST00000498466 AMMECR1Q9Y4X0 333 aaPredicted RBP10.96□□□□□ -0.65
CCDC58-207ENST00000498466 SMAD5-AS1Q9Y6J3 95 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms