RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 PSTPIP2Q9H939 334 aa2.47□□□□□ -2.01
SMC4-224ENST00000494612 FBXO8Q9NRD0 319 aa2.47□□□□□ -2.01
SMC4-224ENST00000494612 OTOGLQ3ZCN5 2332 aa2.47□□□□□ -2.01
SMC4-224ENST00000494612 ZZEF1O43149 2961 aa2.46□□□□□ -2.01
SMC4-224ENST00000494612 DOCK8Q8NF50 2099 aa2.46□□□□□ -2.01
SMC4-224ENST00000494612 DOCK9Q9BZ29 2069 aa2.46□□□□□ -2.01
SMC4-224ENST00000494612 LOC400499M0QZD8 3231 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 PDCD11Q14690 1871 aaKnown RBP2.46□□□□□ -2.02
SMC4-224ENST00000494612 CEP250Q9BV73 2442 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 CENPXA8MT69 81 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 ZNF99A8MXY4 864 aaPredicted RBP2.46□□□□□ -2.02
SMC4-224ENST00000494612 K7ERQ8 282 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 XRCC2O43543 280 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 SLC16A7O60669 478 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 APOA1P02647 267 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 CATP04040 527 aaKnown RBP2.46□□□□□ -2.02
SMC4-224ENST00000494612 CFHR2P36980 270 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 PPICP45877 212 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 AP1S2P56377 157 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 ITGB3BPQ13352 177 aaPredicted RBP2.46□□□□□ -2.02
SMC4-224ENST00000494612 YIF1BQ5BJH7 314 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 OPN5Q6U736 354 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 SYCE1Q8N0S2 351 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 ARHGAP18Q8N392 663 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 LRRC52Q8N7C0 313 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 DRAXINQ8NBI3 349 aaPredicted RBP2.46□□□□□ -2.02
SMC4-224ENST00000494612 UBAC2Q8NBM4 344 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 DEFB124Q8NES8 71 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 OR5T1Q8NG75 326 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 OR9A2Q8NGT5 310 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 OR10G6Q8NH81 332 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 TCP10LQ8TDR4 215 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 FAM131CQ96AQ9 280 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 TMEM159Q96B96 161 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 SCRT1Q9BWW7 348 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 NRBP2Q9NSY0 501 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 RHBDL2Q9NX52 303 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 C21orf62Q9NYP8 219 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 ADA2Q9NZK5 511 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 CHMP5Q9NZZ3 219 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 MYH9P35579 1960 aaKnown RBP2.46□□□□□ -2.02
SMC4-224ENST00000494612 LAMA1P25391 3075 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 TPRP12270 2363 aaKnown RBP2.46□□□□□ -2.02
SMC4-224ENST00000494612 TICRRQ7Z2Z1 1910 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 LAMA5O15230 3695 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 FAM208BQ5VWN6 2430 aa2.46□□□□□ -2.02
SMC4-224ENST00000494612 SMG1Q96Q15 3661 aaKnown RBP2.45□□□□□ -2.02
SMC4-224ENST00000494612 PKD1L2Q7Z442 2459 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 IGLV3-12A0A075B6K2 115 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 TRAV6A0A075B6T7 132 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 IGHV3OR16-9A0A0B4J2B5 98 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 SPAARA0A1B0GVQ0 90 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 ARL5CA6NH57 179 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 LGALS9O00182 355 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 TNFRSF11BO00300 401 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 YKT6O15498 198 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 ERI3O43414 337 aaKnown RBP2.45□□□□□ -2.02
SMC4-224ENST00000494612 ETHE1O95571 254 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 PTTG1O95997 202 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 GLAP06280 429 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 CSRP1P21291 193 aaKnown RBP2.45□□□□□ -2.02
SMC4-224ENST00000494612 CCNOP22674 350 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 TNNC1P63316 161 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 PNOCQ13519 176 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 GPR176Q14439 515 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 PRSS8Q16651 343 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 OR2T5Q6IEZ7 315 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 WDR82Q6UXN9 313 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 RTL4Q6ZR62 310 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 Q6ZS52 159 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 RAB43Q86YS6 212 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 OR2T29Q8NH02 315 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 DEDD2Q8WXF8 326 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 CDS1Q92903 461 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 SPZ1Q9BXG8 430 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 ZNF442Q9H7R0 627 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 EXOSC4Q9NPD3 245 aaKnown RBP2.45□□□□□ -2.02
SMC4-224ENST00000494612 PRSS16Q9NQE7 514 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 RBFOX1Q9NWB1 397 aaKnown RBP2.45□□□□□ -2.02
SMC4-224ENST00000494612 ZMAT5Q9UDW3 170 aaKnown RBP2.45□□□□□ -2.02
SMC4-224ENST00000494612 HES2Q9Y543 173 aa2.45□□□□□ -2.02
SMC4-224ENST00000494612 CHD8Q9HCK8 2581 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 DMXL2Q8TDJ6 3036 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 IGHV3-72A0A0B4J1Y9 119 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 IGHV7-4-1A0A0J9YVY3 117 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 RAB19A4D1S5 217 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 CDRT1O95170 752 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 PLEKHA8P1O95397 391 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 IGHV3-11P01762 117 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 PRB1P04280 392 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 PRKACBP22694 351 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 HOXA6P31267 233 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 ARPP19P56211 112 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 PPIDQ08752 370 aaKnown RBP2.44□□□□□ -2.02
SMC4-224ENST00000494612 ZNF616Q08AN1 781 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 TEX30Q5JUR7 227 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 RWDD4Q6NW29 188 aaKnown RBP2.44□□□□□ -2.02
SMC4-224ENST00000494612 NDNFQ8TB73 568 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 ZNF721Q8TF20 911 aa2.44□□□□□ -2.02
SMC4-224ENST00000494612 RTN4IP1Q8WWV3 396 aaPredicted RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 399.4 ms