RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 CD40LGP29965 261 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 EFNA4P52798 201 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 PPP5CP53041 499 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 MRPS10P82664 201 aaKnown RBP9.56□□□□□ -0.88
MCF2L-231ENST00000494043 ARL6IP1Q15041 203 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 MICBQ29980 383 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 ZNF260Q3ZCT1 412 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 CDNFQ49AH0 187 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 ATAD3CQ5T2N8 411 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 STUMQ69YW2 141 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 Q6ZTK2 550 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 C6orf201Q7Z4U5 140 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 GDPD1Q8N9F7 314 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 C19orf18Q8NEA5 215 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 ST8SIA4Q92187 359 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 GCDHQ92947 438 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-231ENST00000494043 CYYR1Q96J86 154 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 SDHCQ99643 169 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-231ENST00000494043 ZMAT3Q9HA38 289 aaKnown RBP9.56□□□□□ -0.88
MCF2L-231ENST00000494043 SEBOXQ9HB31 216 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-231ENST00000494043 SPACA1Q9HBV2 294 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.56□□□□□ -0.88
MCF2L-231ENST00000494043 OR14J1Q9UGF5 321 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 ZNF222Q9UK12 451 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 KCNK7Q9Y2U2 307 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 PTPN13Q12923 2485 aa9.56□□□□□ -0.88
MCF2L-231ENST00000494043 DYSFO75923 2080 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 DSCAMO60469 2012 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 IGKV1D-17A0A075B6S4 117 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 PPIAL4EA0A075B759 164 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 TRAV24A0A0B4J272 114 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 TMEM235A6NFC5 223 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 PPIAL4DF5H284 164 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 SIRPB1O00241 398 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 SLC33A1O00400 549 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-231ENST00000494043 DEGS1O15121 323 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 NDUFS7O75251 213 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 ZNF205O95201 554 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 GLAP06280 429 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 MELTFP08582 738 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 PPIAL4FP0DN26 164 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 PTHLHP12272 177 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 PRDX2P32119 198 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 CEBPDP49716 269 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-231ENST00000494043 SCN1BQ07699 218 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 PNLIPRP3Q17RR3 467 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 HACD4Q5VWC8 232 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 OLFML2AQ68BL7 652 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 HIST2H2BCQ6DN03 193 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 SFRP4Q6FHJ7 346 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-231ENST00000494043 CD177Q8N6Q3 437 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 SUMF2Q8NBJ7 301 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 OR5T2Q8NGG2 359 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 ANGPTL6Q8NI99 470 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 SMIM4Q8WVI0 70 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 NRGNQ92686 78 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 SULT4A1Q9BR01 284 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 CCDC32Q9BV29 185 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 LIME1Q9H400 295 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 ZNF701Q9NV72 531 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-231ENST00000494043 PLEKHJ1Q9NW61 149 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 ELF5Q9UKW6 265 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-231ENST00000494043 PPIAL4AQ9Y536 164 aa9.55□□□□□ -0.88
MCF2L-231ENST00000494043 TRAV38-1A0A0B4J264 116 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 SERPINE3A8MV23 424 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 GABARAPH6UMI1 98 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 GSTZ1O43708 216 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-231ENST00000494043 CA11O75493 328 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 FSTL3O95633 263 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 IGHV4-39P01824 125 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 TFF1P04155 84 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 LMO1P25800 156 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 PRSS3P35030 304 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 KRTAP10-9P60411 292 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 BTG1P62324 171 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 DGCR2P98153 550 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 GUCA2AQ02747 115 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 COL10A1Q03692 680 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 ZMYND11Q15326 602 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 PAN3Q58A45 887 aaKnown RBP9.54□□□□□ -0.88
MCF2L-231ENST00000494043 RNASE12Q5GAN4 147 aaKnown RBP9.54□□□□□ -0.88
MCF2L-231ENST00000494043 BRICD5Q6PL45 260 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 Q8N402 240 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 DEFB108BQ8NET1 73 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 OR52I2Q8NH67 350 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 NUDCD2Q8WVJ2 157 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 BORCS5Q969J3 196 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 FAAP24Q9BTP7 215 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 DPCDQ9BVM2 203 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-231ENST00000494043 CHODLQ9H9P2 273 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 SCPEP1Q9HB40 452 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 METRNQ9UJH8 293 aa9.54□□□□□ -0.88
MCF2L-231ENST00000494043 AKAP6Q13023 2319 aa9.53□□□□□ -0.88
MCF2L-231ENST00000494043 UBE2QL1A1L167 161 aa9.53□□□□□ -0.88
MCF2L-231ENST00000494043 MEIOCA2RUB1 952 aa9.53□□□□□ -0.88
MCF2L-231ENST00000494043 NKX6-3A6NJ46 265 aa9.53□□□□□ -0.88
MCF2L-231ENST00000494043 MCRIP1C9JLW8 97 aa9.53□□□□□ -0.88
MCF2L-231ENST00000494043 SULT1C2O00338 296 aa9.53□□□□□ -0.88
MCF2L-231ENST00000494043 HSPB6O14558 160 aa9.53□□□□□ -0.88
MCF2L-231ENST00000494043 SSX5O60225 188 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms