RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 LIMS3P0CW19 117 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 LIMS4P0CW20 117 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 COL6A3P12111 3177 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 PSMB5P28074 263 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 POLR2IP36954 125 aaKnown RBP3.06□□□□□ -1.92
GTF3A-208ENST00000493903 PSMB2P49721 201 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 STC1P52823 247 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 NUP98P52948 1817 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 MYL6P60660 151 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 MAGOHP61326 146 aaKnown RBP3.06□□□□□ -1.92
GTF3A-208ENST00000493903 RHOAP61586 193 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 CTAG1AP78358 180 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 PPIDQ08752 370 aaKnown RBP3.06□□□□□ -1.92
GTF3A-208ENST00000493903 CEACAM16Q2WEN9 425 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 ANKRD36CQ5JPF3 1778 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 MAP3K15Q6ZN16 1313 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 FAM92BQ6ZTR7 304 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 CUL9Q8IWT3 2517 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 DDX60Q8IY21 1712 aaKnown RBP3.06□□□□□ -1.92
GTF3A-208ENST00000493903 SLC34A3Q8N130 599 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 RTL9Q8NET4 1388 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 OR6N1Q8NGY5 312 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 FAM45AQ8TCE6 357 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 DNAJB3Q8WWF6 145 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 NELFBQ8WX92 580 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 HGDQ93099 445 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 MRPL48Q96GC5 212 aaKnown RBP3.06□□□□□ -1.92
GTF3A-208ENST00000493903 SNF8Q96H20 258 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 CAMK2N2Q96S95 79 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 HDHD3Q9BSH5 251 aaPredicted RBP3.06□□□□□ -1.92
GTF3A-208ENST00000493903 TMEM100Q9NV29 134 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 RBM22Q9NW64 420 aaKnown RBP eCLIP3.06□□□□□ -1.92
GTF3A-208ENST00000493903 USE1Q9NZ43 259 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 IL17CQ9P0M4 197 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 AKAP11Q9UKA4 1901 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 RAB22AQ9UL26 194 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 CBY1Q9Y3M2 126 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 ORC6Q9Y5N6 252 aa3.06□□□□□ -1.92
GTF3A-208ENST00000493903 ZNF646O15015 1829 aaPredicted RBP3.05□□□□□ -1.92
GTF3A-208ENST00000493903 IGHV5-51A0A0C4DH38 117 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 KRBOX1C9JBD0 128 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 GOLGA8KD6RF30 607 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 GOLGA8MH3BSY2 632 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 CYTH3O43739 400 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 NDUFS5O43920 106 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 UGT2B11O75310 529 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 PSIP1O75475 530 aaKnown RBP3.05□□□□□ -1.92
GTF3A-208ENST00000493903 CA11O75493 328 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 SLC25A27O95847 323 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 LY6G6DO95868 133 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 CGAP01215 116 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 IGKV1D-16P01601 117 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 ADRB3P13945 408 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 CDC34P49427 236 aaPredicted RBP3.05□□□□□ -1.92
GTF3A-208ENST00000493903 BLVRAP53004 296 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 BAXQ07812 192 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 LAMTOR4Q0VGL1 99 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 RBMY1FQ15415 496 aaKnown RBP3.05□□□□□ -1.92
GTF3A-208ENST00000493903 RGS21Q2M5E4 152 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 SLC36A2Q495M3 483 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 C6orf99Q4VX62 202 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 KDM4DQ6B0I6 523 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 NCCRP1Q6ZVX7 275 aaPredicted RBP3.05□□□□□ -1.92
GTF3A-208ENST00000493903 ZNF429Q86V71 674 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 PCP2Q8IVA1 136 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 C11orf42Q8N5U0 333 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 OR2AE1Q8NHA4 323 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 ENKURQ8TC29 256 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 DCAKDQ8WVC6 231 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 KCNS1Q96KK3 526 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 OR10C1Q96KK4 312 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 METTL26Q96S19 204 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 POTEKPQ9BYX7 375 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 RDH14Q9HBH5 336 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 NOX3Q9HBY0 568 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 SLC40A1Q9NP59 571 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 DDX19AQ9NUU7 478 aaKnown RBP3.05□□□□□ -1.92
GTF3A-208ENST00000493903 TRIOBPQ9H2D6 2365 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 A0A0C4DFX4 3053 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 SCN9AQ15858 1988 aa3.05□□□□□ -1.92
GTF3A-208ENST00000493903 IGKV1-27A0A075B6S5 117 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 IGHV5-10-1A0A0J9YXX1 117 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 A0A1B0GUA9 196 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 ZNF705GA8MUZ8 300 aaPredicted RBP3.04□□□□□ -1.92
GTF3A-208ENST00000493903 FTCDNL1E5RQL4 147 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 J3QLI3 93 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 HAT1O14929 419 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 MPZL2O60487 215 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 REM1O75628 298 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 ADAP1O75689 374 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 MPZL1O95297 269 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 HLA-AP01891 365 aaKnown RBP3.04□□□□□ -1.92
GTF3A-208ENST00000493903 OCM2P0CE71 109 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 IGHV1-8P0DP01 117 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 HIST1H1CP16403 213 aaKnown RBP3.04□□□□□ -1.92
GTF3A-208ENST00000493903 RPS12P25398 132 aaKnown RBP3.04□□□□□ -1.92
GTF3A-208ENST00000493903 PSMB9P28065 219 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 HOXA9P31269 272 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 LHX2P50458 406 aa3.04□□□□□ -1.92
GTF3A-208ENST00000493903 WNT4P56705 351 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms