RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TRAV38-1A0A0B4J264 116 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 METTL21EPA6NDL7 271 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 LDLRAD4O15165 306 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 KNG1P01042 644 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 GYPAP02724 150 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 FAM157CP0CG43 387 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 SRD5A1P18405 259 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 RAB6AP20340 208 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 IL2RGP31785 369 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 GABRA2P47869 451 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 RBM11P57052 281 aaKnown RBP11.22□□□□□ -0.61
MSH6-208ENST00000493177 BTG1P62324 171 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 RPS27AP62979 156 aaKnown RBP11.22□□□□□ -0.61
MSH6-208ENST00000493177 IKZF1Q13422 519 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 PDCD1Q15116 288 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 TAF9Q16594 264 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 UBE2NLQ5JXB2 153 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 GLCCI1Q86VQ1 547 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 MRPS24Q96EL2 167 aaKnown RBP11.22□□□□□ -0.61
MSH6-208ENST00000493177 LPAR2Q9HBW0 351 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 RHBDL2Q9NX52 303 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 FBLN5Q9UBX5 448 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 ADAM30Q9UKF2 790 aa11.22□□□□□ -0.61
MSH6-208ENST00000493177 SETD2Q9BYW2 2564 aaPredicted RBP11.21□□□□□ -0.61
MSH6-208ENST00000493177 RFPL4AA6NLU0 287 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 OR2AT4A6NND4 320 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 RFPL4AL1F8VTS6 287 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.21□□□□□ -0.61
MSH6-208ENST00000493177 CTDSP2O14595 271 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 GEMIN2O14893 280 aaKnown RBP11.21□□□□□ -0.61
MSH6-208ENST00000493177 DEGS1O15121 323 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 OR7C1O76099 320 aaPredicted RBP11.21□□□□□ -0.61
MSH6-208ENST00000493177 ZNF44P15621 663 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 MUC1P15941 1255 aaPredicted RBP11.21□□□□□ -0.61
MSH6-208ENST00000493177 CPT2P23786 658 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 S100A5P33763 92 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 SRP14P37108 136 aaKnown RBP11.21□□□□□ -0.61
MSH6-208ENST00000493177 PITPNBP48739 271 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 CEBPDP49716 269 aaPredicted RBP11.21□□□□□ -0.61
MSH6-208ENST00000493177 VEGFCP49767 419 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 IL13RA2Q14627 380 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 KCNJ8Q15842 424 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 FAM189A2Q15884 450 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 CR1LQ2VPA4 569 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 FAM120AOSQ5T036 256 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 ATAD3CQ5T2N8 411 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 TEX36Q5VZQ5 186 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 FAM90A1Q86YD7 464 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 Q8NFD4 153 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 PTX4Q96A99 478 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 PHF21AQ96BD5 680 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 Q96M66 194 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 NICN1Q9BSH3 213 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 NXF2Q9GZY0 626 aaKnown RBP11.21□□□□□ -0.61
MSH6-208ENST00000493177 LPAR5Q9H1C0 372 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 MMP27Q9H306 513 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 PTTG2Q9NZH5 202 aa11.21□□□□□ -0.61
MSH6-208ENST00000493177 NAV3Q8IVL0 2385 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 NKX6-3A6NJ46 265 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 B4DSR2 109 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 SIRPB1O00241 398 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 SH2D1BO14796 132 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 HAND1O96004 215 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 TFF1P04155 84 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 EIF4EP06730 217 aaKnown RBP11.2□□□□□ -0.62
MSH6-208ENST00000493177 PSG2P11465 335 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 PRDX2P32119 198 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 MDH2P40926 338 aaKnown RBP11.2□□□□□ -0.62
MSH6-208ENST00000493177 ZMYND11Q15326 602 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 NHLRC3Q5JS37 347 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 SPIN3Q5JUX0 258 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 NKAPLQ5M9Q1 402 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 LINC00596Q86U02 117 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 CMTM4Q8IZR5 234 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 MUC20Q8N307 709 aaPredicted RBP11.2□□□□□ -0.62
MSH6-208ENST00000493177 DTX3Q8N9I9 347 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 CHST4Q8NCG5 386 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 OR56B1Q8NGI3 324 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 RAB39BQ96DA2 213 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 SLC25A38Q96DW6 304 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 S100A16Q96FQ6 103 aaKnown RBP11.2□□□□□ -0.62
MSH6-208ENST00000493177 TM2D1Q9BX74 207 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 PEX16Q9Y5Y5 336 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 A3GALT2U3KPV4 340 aa11.2□□□□□ -0.62
MSH6-208ENST00000493177 A0A0A6YYD4 124 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 CLPXO76031 633 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 IGHV2-70P01814 119 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 APOA1P02647 267 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 CHRM2P08172 466 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 ELK1P19419 428 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 BLVRBP30043 206 aaPredicted RBP11.19□□□□□ -0.62
MSH6-208ENST00000493177 TALDO1P37837 337 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 MADCAM1Q13477 382 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 ZNF146Q15072 292 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 MPV17LQ2QL34 196 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 STUMQ69YW2 141 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 LAX1Q8IWV1 398 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 RAB40AQ8WXH6 277 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 CMTM3Q96MX0 182 aa11.19□□□□□ -0.62
MSH6-208ENST00000493177 NEDD4LQ96PU5 975 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms