RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 OR2H2O95918 312 aa20.1■□□□□ 0.81
UPF3A-209ENST00000492270 PAHP00439 452 aa20.1■□□□□ 0.81
UPF3A-209ENST00000492270 RAB3AP20336 220 aa20.1■□□□□ 0.81
UPF3A-209ENST00000492270 PAX6P26367 422 aa20.1■□□□□ 0.81
UPF3A-209ENST00000492270 OR3A1P47881 315 aa20.1■□□□□ 0.81
UPF3A-209ENST00000492270 BPIFB6Q8NFQ5 453 aa20.1■□□□□ 0.81
UPF3A-209ENST00000492270 TMEM106AQ96A25 262 aa20.1■□□□□ 0.81
UPF3A-209ENST00000492270 CHCHD3Q9NX63 227 aaKnown RBP20.1■□□□□ 0.81
UPF3A-209ENST00000492270 CNOT2Q9NZN8 540 aaKnown RBP20.1■□□□□ 0.81
UPF3A-209ENST00000492270 GABRPO00591 440 aa20.09■□□□□ 0.81
UPF3A-209ENST00000492270 CD2P06729 351 aa20.09■□□□□ 0.81
UPF3A-209ENST00000492270 ZNF728P0DKX0 622 aa20.09■□□□□ 0.81
UPF3A-209ENST00000492270 C21orf33P30042 268 aaPredicted RBP20.09■□□□□ 0.81
UPF3A-209ENST00000492270 MED21Q13503 144 aa20.09■□□□□ 0.81
UPF3A-209ENST00000492270 DMKNQ6E0U4 476 aaPredicted RBP20.09■□□□□ 0.81
UPF3A-209ENST00000492270 SATL1Q86VE3 508 aa20.09■□□□□ 0.81
UPF3A-209ENST00000492270 DYRK2Q92630 601 aa20.09■□□□□ 0.81
UPF3A-209ENST00000492270 ZNF747Q9BV97 191 aa20.09■□□□□ 0.81
UPF3A-209ENST00000492270 DPAGT1Q9H3H5 408 aa20.09■□□□□ 0.81
UPF3A-209ENST00000492270 HEXA-AS1Q9H8Q6 139 aa20.09■□□□□ 0.81
UPF3A-209ENST00000492270 PLCXD1Q9NUJ7 323 aa20.09■□□□□ 0.81
UPF3A-209ENST00000492270 ZNF281Q9Y2X9 895 aa20.09■□□□□ 0.81
UPF3A-209ENST00000492270 hCG_1809904A0A1W2PP81 198 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 A0A1W2PPE2 198 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 A0A1W2PR64 198 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 A0A1W2PRV1 198 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 SH2D1BO14796 132 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 CRYBA1P05813 215 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 AQP4P55087 323 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 RAG2P55895 527 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 MIDNQ504T8 468 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 ZSCAN4Q8NAM6 433 aaPredicted RBP20.08■□□□□ 0.81
UPF3A-209ENST00000492270 GHSRQ92847 366 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 PGLYRP3Q96LB9 341 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 ZNF714Q96N38 554 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 GLS2Q9UI32 602 aa20.08■□□□□ 0.81
UPF3A-209ENST00000492270 NBEAL1Q6ZS30 2694 aa20.07■□□□□ 0.8
UPF3A-209ENST00000492270 PNMA8CA0A1B0GUJ8 204 aa20.07■□□□□ 0.8
UPF3A-209ENST00000492270 MGST3O14880 152 aa20.07■□□□□ 0.8
UPF3A-209ENST00000492270 MEF2CQ06413 473 aaPredicted RBP20.07■□□□□ 0.8
UPF3A-209ENST00000492270 SCN1BQ07699 218 aa20.07■□□□□ 0.8
UPF3A-209ENST00000492270 Q6P435 159 aa20.07■□□□□ 0.8
UPF3A-209ENST00000492270 STX19Q8N4C7 294 aa20.07■□□□□ 0.8
UPF3A-209ENST00000492270 BEND2Q8NDZ0 799 aa20.07■□□□□ 0.8
UPF3A-209ENST00000492270 TNFAIP8L1Q8WVP5 186 aa20.07■□□□□ 0.8
UPF3A-209ENST00000492270 GPER1Q99527 375 aa20.07■□□□□ 0.8
UPF3A-209ENST00000492270 PPA2Q9H2U2 334 aa20.07■□□□□ 0.8
UPF3A-209ENST00000492270 VPREB3Q9UKI3 123 aa20.07■□□□□ 0.8
UPF3A-209ENST00000492270 TRBV5-5A0A0J9YX44 114 aa20.06■□□□□ 0.8
UPF3A-209ENST00000492270 hADV38S2A0JD32 116 aa20.06■□□□□ 0.8
UPF3A-209ENST00000492270 MAGEB3O15480 346 aa20.06■□□□□ 0.8
UPF3A-209ENST00000492270 ZNF44P15621 663 aa20.06■□□□□ 0.8
UPF3A-209ENST00000492270 P2RX3P56373 397 aa20.06■□□□□ 0.8
UPF3A-209ENST00000492270 RPS11P62280 158 aaKnown RBP eCLIP20.06■□□□□ 0.8
UPF3A-209ENST00000492270 LHFPL4Q7Z7J7 247 aa20.06■□□□□ 0.8
UPF3A-209ENST00000492270 OR10K1Q8NGX5 313 aa20.06■□□□□ 0.8
UPF3A-209ENST00000492270 FAM192AQ9GZU8 254 aa20.06■□□□□ 0.8
UPF3A-209ENST00000492270 RHOFQ9HBH0 211 aa20.06■□□□□ 0.8
UPF3A-209ENST00000492270 FKBP14Q9NWM8 211 aa20.06■□□□□ 0.8
UPF3A-209ENST00000492270 LINC00312Q9Y6C7 94 aa20.06■□□□□ 0.8
UPF3A-209ENST00000492270 MYL12BO14950 172 aa20.05■□□□□ 0.8
UPF3A-209ENST00000492270 IGHV1-8P0DP01 117 aa20.05■□□□□ 0.8
UPF3A-209ENST00000492270 LMO1P25800 156 aa20.05■□□□□ 0.8
UPF3A-209ENST00000492270 OR3A4PP47883 348 aa20.05■□□□□ 0.8
UPF3A-209ENST00000492270 PXT1Q8NFP0 134 aa20.05■□□□□ 0.8
UPF3A-209ENST00000492270 PCDHGB5Q9Y5G0 923 aa20.05■□□□□ 0.8
UPF3A-209ENST00000492270 A0A0G2JK05 382 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 MAGEA13PA6NCF6 341 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 BTBD17A6NE02 478 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 H3BUX3 64 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 SLC33A1O00400 549 aaPredicted RBP20.04■□□□□ 0.8
UPF3A-209ENST00000492270 NDUFA7O95182 113 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 RBP4P02753 201 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 MTNR1BP49286 362 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 AESQ08117 197 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 DDI2Q5TDH0 399 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 OR4F5Q8NH21 305 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 PPP1R35Q8TAP8 253 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 CPNE2Q96FN4 548 aaPredicted RBP20.04■□□□□ 0.8
UPF3A-209ENST00000492270 NR1H4Q96RI1 486 aaPredicted RBP20.04■□□□□ 0.8
UPF3A-209ENST00000492270 SSX3Q99909 188 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 ING3Q9NXR8 418 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 MMP24Q9Y5R2 645 aa20.04■□□□□ 0.8
UPF3A-209ENST00000492270 MMP23AO75900 390 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 IGFBP3P17936 291 aaPredicted RBP20.03■□□□□ 0.8
UPF3A-209ENST00000492270 ERP29P30040 261 aaKnown RBP20.03■□□□□ 0.8
UPF3A-209ENST00000492270 GLIPR1P48060 266 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 WNT4P56705 351 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 RPL15P61313 204 aaKnown RBP20.03■□□□□ 0.8
UPF3A-209ENST00000492270 PPP3R1P63098 170 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 Q499Y3 187 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 YIF1BQ5BJH7 314 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 ELP2Q6IA86 826 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 SHISA2Q6UWI4 295 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 GDPGP1Q6ZNW5 385 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 TRAPPC6BQ86SZ2 158 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 DYNAPQ8N1N2 210 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 SGCDQ92629 289 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 OR14A2Q96R54 314 aa20.03■□□□□ 0.8
UPF3A-209ENST00000492270 TMEM138Q9NPI0 162 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms