RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 SOX2P48431 317 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 ETV1P50549 477 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 P2RX3P56373 397 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 SCN1BQ07699 218 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 DYNC1I2Q13409 638 aaKnown RBP12.15□□□□□ -0.46
TOM1-215ENST00000491987 IL18R1Q13478 541 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 AANATQ16613 207 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 ZNF691Q5VV52 312 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 ZNF626Q68DY1 528 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 TRAPPC6BQ86SZ2 158 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 SAXO1Q8IYX7 474 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 PARP16Q8N5Y8 322 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 PPP1R35Q8TAP8 253 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 CYGBQ8WWM9 190 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 RGP1Q92546 391 aaPredicted RBP12.15□□□□□ -0.46
TOM1-215ENST00000491987 JAM3Q9BX67 310 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 TCF7L1Q9HCS4 588 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 TBL2Q9Y4P3 447 aaKnown RBP12.15□□□□□ -0.46
TOM1-215ENST00000491987 PCDHGB5Q9Y5G0 923 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 MGAM2Q2M2H8 2515 aa12.15□□□□□ -0.46
TOM1-215ENST00000491987 TIMM23O14925 209 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 TMEM225BP0DP42 221 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 ZNF44P15621 663 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 ERP29P30040 261 aaKnown RBP12.14□□□□□ -0.47
TOM1-215ENST00000491987 GABRA5P31644 462 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 ZP1P60852 638 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 RCN1Q15293 331 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 KISS1Q15726 138 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 FAM189A2Q15884 450 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 LDLRAD2Q5SZI1 272 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 OR2G6Q5TZ20 316 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 XAF1Q6GPH4 301 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 OR11H6Q8NGC7 330 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 OR51A2Q8NGJ7 313 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 OR4C13Q8NGP0 309 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 PIFOQ8TCI5 191 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 HAVCR2Q8TDQ0 301 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 FOXRED1Q96CU9 486 aaPredicted RBP12.14□□□□□ -0.47
TOM1-215ENST00000491987 SIGLEC9Q9Y336 463 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 SESN1Q9Y6P5 492 aa12.14□□□□□ -0.47
TOM1-215ENST00000491987 M0QZ24 198 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 CHST1O43916 411 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 ALX3O95076 343 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 RAB3AP20336 220 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 DCKP27707 260 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 RAB13P51153 203 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 AESQ08117 197 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 CDK5R1Q15078 307 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 SSX2Q16385 188 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 ASPHD2Q6ICH7 369 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 GPER1Q99527 375 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 NKX3-1Q99801 234 aaPredicted RBP12.13□□□□□ -0.47
TOM1-215ENST00000491987 RHOFQ9HBH0 211 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 RAB18Q9NP72 206 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 TAS2R4Q9NYW5 299 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.13□□□□□ -0.47
TOM1-215ENST00000491987 FBLN5Q9UBX5 448 aa12.13□□□□□ -0.47
TOM1-215ENST00000491987 TRGV10A0A0A0MS01 117 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 IGHV2-26A0A0B4J1V2 119 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 A0A0G2JK05 382 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 IRGMA1A4Y4 181 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 GABRPO00591 440 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 MMP23AO75900 390 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 LMO1P25800 156 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 GLIPR1P48060 266 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 CCDC58Q4VC31 144 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 PRAMEF5Q5TYX0 476 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 TTC23Q5W5X9 447 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 Q6P435 159 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 RPL22L1Q6P5R6 122 aaKnown RBP12.12□□□□□ -0.47
TOM1-215ENST00000491987 TMPRSS11AQ6ZMR5 421 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 LIAT1Q6ZQX7 453 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 SATL1Q86VE3 508 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 PACRGLQ8N7B6 248 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 RPS4Y2Q8TD47 263 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 GPR148Q8TDV2 347 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 MALSU1Q96EH3 234 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 TMEM133Q9H2Q1 129 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 ABCB10Q9NRK6 738 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 ING3Q9NXR8 418 aa12.12□□□□□ -0.47
TOM1-215ENST00000491987 UBE2J1Q9Y385 318 aaPredicted RBP12.12□□□□□ -0.47
TOM1-215ENST00000491987 DSCAML1Q8TD84 2053 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 FUOMA2VDF0 154 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 MEGF11A6BM72 1044 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 VGLL3A8MV65 326 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 SLC33A1O00400 549 aaPredicted RBP12.11□□□□□ -0.47
TOM1-215ENST00000491987 DEGS1O15121 323 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 MAGEB3O15480 346 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 WIPF1O43516 503 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 CD2P06729 351 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 MYL12AP19105 171 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 KIR2DS4P43632 304 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 MTNR1BP49286 362 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 EFNB2P52799 333 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 ADARB1P78563 741 aaKnown RBP12.11□□□□□ -0.47
TOM1-215ENST00000491987 ATXN7L3Q14CW9 347 aaPredicted RBP12.11□□□□□ -0.47
TOM1-215ENST00000491987 ZNF529Q6P280 563 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 BAIAP2L2Q6UXY1 529 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 TMEM219Q86XT9 240 aa12.11□□□□□ -0.47
TOM1-215ENST00000491987 DHRSXQ8N5I4 330 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms