RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 RGNQ15493 299 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 SLC9A3R2Q15599 337 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 MOGQ16653 247 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF506Q5JVG8 444 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 HACD4Q5VWC8 232 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 ANKRD22Q5VYY1 191 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 C11orf71Q6IPW1 123 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 GDPD3Q7L5L3 318 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 BBS7Q8IWZ6 715 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 CPNE9Q8IYJ1 553 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 ZCCHC24Q8N2G6 241 aaKnown RBP2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 STPG2Q8N412 459 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 DOK4Q8TEW6 326 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 RAB8BQ92930 207 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 IL22RA2Q969J5 263 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 TMEM230Q96A57 120 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 RCN3Q96D15 328 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 VSIG2Q96IQ7 327 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 C18orf12Q96KH6 178 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 FCRL1Q96LA6 429 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 SIGLEC12Q96PQ1 595 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 SPACA5Q96QH8 159 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 HBEGFQ99075 208 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 VAT1Q99536 393 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 GABARAPL3Q9BY60 117 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 CXCL16Q9H2A7 254 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 MS4A6AQ9H2W1 248 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 TUBB1Q9H4B7 451 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 SLCO1B3Q9NPD5 702 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 IMPAD1Q9NX62 359 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 MOKQ9UQ07 419 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 MTCL1Q9Y4B5 1905 aaKnown RBP2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 COL4A6Q14031 1691 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 SIP14410 1827 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 IGSF9BQ9UPX0 1349 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 BDP1A6H8Y1 2624 aa2.36□□□□□ -2.03
DEPDC1-204ENST00000489862 MYO9BQ13459 2157 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 DMDP11532 3685 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 PTPRSQ13332 1948 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 IGKV6-21A0A0C4DH24 114 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 IGKV1-8A0A0C4DH67 115 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 A6NDN8 102 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 GJE1A6NN92 205 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CEACAM18A8MTB9 384 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 EVPLLA8MZ36 301 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 J3QT63 122 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 XKRYO14609 159 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TNFSF13O75888 250 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 DHRS3O75911 302 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 IGHV3-48P01763 117 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CALB1P05937 261 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 OR4E1P0C645 316 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CCDC166P0CW27 439 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 C8orf88P0DMB2 117 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 PSMA1P25786 263 aaKnown RBP2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 FMO3P31513 532 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 PFN2P35080 140 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 IFNGR2P38484 337 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 REG1BP48304 166 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 HSPA13P48723 471 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 OR12D2P58182 307 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 KRTAP12-2P59991 146 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 ARPC4P59998 168 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 RAB14P61106 215 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CXCL6P80162 114 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 SARNPP82979 210 aaKnown RBP2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 RUNX3Q13761 415 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 KIAA0087Q14695 138 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 PON3Q15166 354 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TGIF1Q15583 401 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 POU2AF1Q16633 256 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 LRRC36Q1X8D7 754 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 HLA-DRB5Q30154 266 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 SPIN4Q56A73 249 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 DNM1P34Q6PK57 102 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CD200R1LQ6Q8B3 271 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TMEM135Q86UB9 458 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CATSPER3Q86XQ3 398 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CALHM1Q8IU99 346 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 NKAPP1Q8N9T2 125 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CSNK1G2-AS1Q8NCQ2 148 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 OR5B17Q8NGF7 314 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 OR4C13Q8NGP0 309 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 MRGPRDQ8TDS7 321 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 RAD51AP1Q96B01 352 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TESCQ96BS2 214 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TLCD1Q96CP7 247 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 GPR21Q99679 349 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 HOPXQ9BPY8 73 aaPredicted RBP2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TAPBPLQ9BX59 468 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 SELENOIQ9C0D9 397 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 EDA2RQ9HAV5 297 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 PLGRKTQ9HBL7 147 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 CCL28Q9NRJ3 127 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 RGS18Q9NS28 235 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 RAB23Q9ULC3 237 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 TP53TG1Q9Y2A0 90 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 AP3M1Q9Y2T2 418 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 SIGLEC9Q9Y336 463 aa2.35□□□□□ -2.03
DEPDC1-204ENST00000489862 SMIM26A0A096LP01 95 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms