RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ZFPL1O95159 310 aa18.6■□□□□ 0.57
COL9A3-213ENST00000489045 KIR2DS4P43632 304 aa18.6■□□□□ 0.57
COL9A3-213ENST00000489045 EFNB2P52799 333 aa18.6■□□□□ 0.57
COL9A3-213ENST00000489045 FAM189A2Q15884 450 aa18.6■□□□□ 0.57
COL9A3-213ENST00000489045 SSX2Q16385 188 aa18.6■□□□□ 0.57
COL9A3-213ENST00000489045 MALSU1Q96EH3 234 aa18.6■□□□□ 0.57
COL9A3-213ENST00000489045 RPL36Q9Y3U8 105 aaKnown RBP18.6■□□□□ 0.57
COL9A3-213ENST00000489045 SESN1Q9Y6P5 492 aa18.6■□□□□ 0.57
COL9A3-213ENST00000489045 TMEM212A6NML5 194 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 SH2D1BO14796 132 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 TSPAN15O95858 294 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 OR2H2O95918 312 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 CCDC159P0C7I6 412 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 RAB13P51153 203 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 P2RX3P56373 397 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 DEFA6Q01524 100 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 MRPL28Q13084 256 aaKnown RBP18.59■□□□□ 0.57
COL9A3-213ENST00000489045 TRAPPC6BQ86SZ2 158 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 OR5AK2Q8NH90 309 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 OR2T6Q8NHC8 308 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 NKX3-1Q99801 234 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-213ENST00000489045 PDCD1LG2Q9BQ51 273 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 NPFFR1Q9GZQ6 430 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 COMMD4Q9H0A8 199 aa18.59■□□□□ 0.57
COL9A3-213ENST00000489045 MRPS18AQ9NVS2 196 aaKnown RBP18.59■□□□□ 0.57
COL9A3-213ENST00000489045 IGHV2-26A0A0B4J1V2 119 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 SULT1B1O43704 296 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 BAG2O95816 211 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 HCKP08631 526 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 RPSAP08865 295 aaKnown RBP18.58■□□□□ 0.56
COL9A3-213ENST00000489045 ERP29P30040 261 aaKnown RBP18.58■□□□□ 0.56
COL9A3-213ENST00000489045 GBX2P52951 348 aaPredicted RBP18.58■□□□□ 0.56
COL9A3-213ENST00000489045 KLHL22Q53GT1 634 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 SERPINA12Q8IW75 414 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 SAXO1Q8IYX7 474 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 PARP16Q8N5Y8 322 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 OR5D14Q8NGL3 314 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 TSEN15Q8WW01 171 aaKnown RBP18.58■□□□□ 0.56
COL9A3-213ENST00000489045 TMEM133Q9H2Q1 129 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 ABCB10Q9NRK6 738 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 DHDHQ9UQ10 334 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 TCF19Q9Y242 345 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 UBE2J1Q9Y385 318 aaPredicted RBP18.58■□□□□ 0.56
COL9A3-213ENST00000489045 PCDHGB5Q9Y5G0 923 aa18.58■□□□□ 0.56
COL9A3-213ENST00000489045 MMP23AO75900 390 aa18.57■□□□□ 0.56
COL9A3-213ENST00000489045 ZNF44P15621 663 aa18.57■□□□□ 0.56
COL9A3-213ENST00000489045 ZP1P60852 638 aa18.57■□□□□ 0.56
COL9A3-213ENST00000489045 HERPUD1Q15011 391 aa18.57■□□□□ 0.56
COL9A3-213ENST00000489045 SMN1Q16637 294 aaKnown RBP18.57■□□□□ 0.56
COL9A3-213ENST00000489045 C2orf68Q2NKX9 166 aa18.57■□□□□ 0.56
COL9A3-213ENST00000489045 CCBE1Q6UXH8 406 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-213ENST00000489045 RPS4Y2Q8TD47 263 aa18.57■□□□□ 0.56
COL9A3-213ENST00000489045 RHOFQ9HBH0 211 aa18.57■□□□□ 0.56
COL9A3-213ENST00000489045 SMPD3Q9NY59 655 aaPredicted RBP18.57■□□□□ 0.56
COL9A3-213ENST00000489045 FOXJ3Q9UPW0 622 aa18.57■□□□□ 0.56
COL9A3-213ENST00000489045 WBP4O75554 376 aaKnown RBP18.56■□□□□ 0.56
COL9A3-213ENST00000489045 ALX3O95076 343 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 LIMS3P0CW19 117 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 LIMS4P0CW20 117 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 TMEM225BP0DP42 221 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 LMO1P25800 156 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 GTF2A1P52655 376 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-213ENST00000489045 SCN1BQ07699 218 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 IL18R1Q13478 541 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 KISS1Q15726 138 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 LPCAT4Q643R3 524 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 C11orf88Q6PI97 169 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 Q6ZTK2 550 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 TMEM219Q86XT9 240 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 KLHDC1Q8N7A1 406 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 ZNF555Q8NEP9 628 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 NDNFQ8TB73 568 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 CLEC7AQ9BXN2 247 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 FGF20Q9NP95 211 aaPredicted RBP18.56■□□□□ 0.56
COL9A3-213ENST00000489045 HILPDAQ9Y5L2 63 aa18.56■□□□□ 0.56
COL9A3-213ENST00000489045 TRGV10A0A0A0MS01 117 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 A6NDX4 124 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 JUNBP17275 347 aaPredicted RBP18.55■□□□□ 0.56
COL9A3-213ENST00000489045 GLIPR1P48060 266 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 AESQ08117 197 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 ZSCAN26Q16670 478 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 MINOS1Q5TGZ0 78 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 PRAMEF5Q5TYX0 476 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 Q6P435 159 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 HAVCR2Q8TDQ0 301 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 RDH12Q96NR8 316 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 JAM3Q9BX67 310 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 CDCA4Q9BXL8 241 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 GAL3ST2Q9H3Q3 398 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 MINOS1-NBL1R4GNA1 71 aa18.55■□□□□ 0.56
COL9A3-213ENST00000489045 A0A0G2JK05 382 aa18.54■□□□□ 0.56
COL9A3-213ENST00000489045 ZNF691Q5VV52 312 aa18.54■□□□□ 0.56
COL9A3-213ENST00000489045 HIST2H2BDQ6DRA6 164 aa18.54■□□□□ 0.56
COL9A3-213ENST00000489045 BAIAP2L2Q6UXY1 529 aa18.54■□□□□ 0.56
COL9A3-213ENST00000489045 C11orf44Q8N8P7 122 aa18.54■□□□□ 0.56
COL9A3-213ENST00000489045 CHST4Q8NCG5 386 aa18.54■□□□□ 0.56
COL9A3-213ENST00000489045 FAM110DQ8TAY7 271 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-213ENST00000489045 RGP1Q92546 391 aaPredicted RBP18.54■□□□□ 0.56
COL9A3-213ENST00000489045 STMN2Q93045 179 aa18.54■□□□□ 0.56
COL9A3-213ENST00000489045 ZNF702PQ9H963 129 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms