RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 LY6EQ16553 131 aa14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 CCDC58Q4VC31 144 aa14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 ZNF691Q5VV52 312 aa14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 TTC23Q5W5X9 447 aa14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 LHFPL4Q7Z7J7 247 aa14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 PIFOQ8TCI5 191 aa14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 EXOSC4Q9NPD3 245 aaKnown RBP14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 C8orf4Q9NR00 106 aa14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 TBL2Q9Y4P3 447 aaKnown RBP14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 PCDHGB5Q9Y5G0 923 aa14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 MGAM2Q2M2H8 2515 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 ODF3BA8MYP8 253 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 SIRPB1O00241 398 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 CLIC3O95833 236 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 OR2H2O95918 312 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 ARG1P05089 322 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 HCKP08631 526 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 OR3A1P47881 315 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 ETV1P50549 477 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 KISS1Q15726 138 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 LRRC36Q1X8D7 754 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 ZNF626Q68DY1 528 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 RPL22L1Q6P5R6 122 aaKnown RBP14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 PACRGLQ8N7B6 248 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 CNIH3Q8TBE1 160 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 TSEN15Q8WW01 171 aaKnown RBP14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 MALSU1Q96EH3 234 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 RAB18Q9NP72 206 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 FBLN5Q9UBX5 448 aa14.92□□□□□ -0.02
PRPF40A-209ENST00000486100 IRGMA1A4Y4 181 aa14.91□□□□□ -0.02
PRPF40A-209ENST00000486100 VGLL3A8MV65 326 aa14.91□□□□□ -0.02
PRPF40A-209ENST00000486100 TIMM23O14925 209 aa14.91□□□□□ -0.02
PRPF40A-209ENST00000486100 TMEM225BP0DP42 221 aa14.91□□□□□ -0.02
PRPF40A-209ENST00000486100 P2RX3P56373 397 aa14.91□□□□□ -0.02
PRPF40A-209ENST00000486100 ZP1P60852 638 aa14.91□□□□□ -0.02
PRPF40A-209ENST00000486100 TMPRSS11AQ6ZMR5 421 aa14.91□□□□□ -0.02
PRPF40A-209ENST00000486100 DYNAPQ8N1N2 210 aa14.91□□□□□ -0.02
PRPF40A-209ENST00000486100 CYGBQ8WWM9 190 aa14.91□□□□□ -0.02
PRPF40A-209ENST00000486100 UBE2J1Q9Y385 318 aaPredicted RBP14.91□□□□□ -0.02
PRPF40A-209ENST00000486100 SESN1Q9Y6P5 492 aa14.91□□□□□ -0.02
PRPF40A-209ENST00000486100 A0A0G2JK05 382 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 FUOMA2VDF0 154 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 RAB3AP20336 220 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 KIR2DS4P43632 304 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 ADARB1P78563 741 aaKnown RBP14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 SCN1BQ07699 218 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 DYNC1I2Q13409 638 aaKnown RBP14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 IL18R1Q13478 541 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 OR2G6Q5TZ20 316 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 XAF1Q6GPH4 301 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 ZNF529Q6P280 563 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 Q6P435 159 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 LIAT1Q6ZQX7 453 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 DHRSXQ8N5I4 330 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 CHST4Q8NCG5 386 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 RPS4Y2Q8TD47 263 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 GPR148Q8TDV2 347 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 RGP1Q92546 391 aaPredicted RBP14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 CORO2AQ92828 525 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 FOXRED1Q96CU9 486 aaPredicted RBP14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 BABAM2Q9NXR7 383 aa14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 DIMT1Q9UNQ2 313 aaKnown RBP14.9□□□□□ -0.02
PRPF40A-209ENST00000486100 M0QZ24 198 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 DEGS1O15121 323 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 MAGEB3O15480 346 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 ZNF44P15621 663 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 GABRA5P31644 462 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 SOX2P48431 317 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 CDK5R1Q15078 307 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 SSX2Q16385 188 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 LDLRAD2Q5SZI1 272 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 ASPHD2Q6ICH7 369 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 TRAPPC6BQ86SZ2 158 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 SETD9Q8NE22 299 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 PXT1Q8NFP0 134 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 CPNE2Q96FN4 548 aaPredicted RBP14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 CDCA4Q9BXL8 241 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 TMEM133Q9H2Q1 129 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 TCF7L1Q9HCS4 588 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 EXOSC1Q9Y3B2 195 aaKnown RBP14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 PKD1L1Q8TDX9 2849 aa14.89□□□□□ -0.03
PRPF40A-209ENST00000486100 TRGV10A0A0A0MS01 117 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 IGHV2-26A0A0B4J1V2 119 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 OGG1O15527 345 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 MMP23AO75900 390 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 CSN2P05814 226 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 CD2P06729 351 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 MYL12AP19105 171 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 GLIPR1P48060 266 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 MTNR1BP49286 362 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 RAB13P51153 203 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 AESQ08117 197 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 RCN1Q15293 331 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 FAM189A2Q15884 450 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 MINOS1Q5TGZ0 78 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 ELP2Q6IA86 826 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 SATL1Q86VE3 508 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 DTX3Q8N9I9 347 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 OR51A2Q8NGJ7 313 aa14.88□□□□□ -0.03
PRPF40A-209ENST00000486100 TMEM80Q96HE8 168 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms