RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 PSG4Q00888 419 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 ZNF92Q03936 586 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 SMCO1Q147U7 214 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 ZFP82Q8N141 532 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 UBAC2Q8NBM4 344 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 OR5L1Q8NGL2 311 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 OR2Y1Q8NGV0 311 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 C2CD4CQ8TF44 421 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 SECTM1Q8WVN6 248 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 GALNT14Q96FL9 552 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 AKR1E2Q96JD6 320 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 SCRT1Q9BWW7 348 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 ARV1Q9H2C2 271 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 TCFL5Q9UL49 500 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 SHANK1Q9Y566 2161 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 CBR3O75828 277 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 NRASP01111 189 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 AKR1D1P51857 326 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 RAC3P60763 192 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 FAM3AP98173 230 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 C5orf24Q7Z6I8 188 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 DMBX1Q8NFW5 382 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 GLYATL2Q8WU03 294 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 MSI2Q96DH6 328 aaKnown RBP12.85□□□□□ -0.35
ATG4B-220ENST00000482507 BORCS8Q96FH0 119 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 C18orf12Q96KH6 178 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 WNT5BQ9H1J7 359 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 SLC2A9Q9NRM0 540 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 CACFD1Q9UGQ2 172 aa12.85□□□□□ -0.35
ATG4B-220ENST00000482507 ZNF587BE7ETH6 402 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 ZNHIT1O43257 154 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 FOLR3P41439 243 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 HTR5AP47898 357 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 CNN3Q15417 329 aaKnown RBP12.84□□□□□ -0.35
ATG4B-220ENST00000482507 SF3B5Q9BWJ5 86 aaKnown RBP12.84□□□□□ -0.35
ATG4B-220ENST00000482507 IL17BQ9UHF5 180 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 CEP295Q9C0D2 2601 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 hCG_38984A0A1B0GV85 526 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 ZNF98A6NK75 572 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 H7C1Q1 480 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 CXCL13O43927 109 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 NME2P1O60361 137 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 C1QL1O75973 258 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 HOXA1P49639 335 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-220ENST00000482507 DVL1P1P54792 670 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-220ENST00000482507 CLDN15P56746 228 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 ABCA11PQ4W5N1 156 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 OSR2Q8N2R0 312 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 SH3BGRL3Q9H299 93 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 PLEKHA2Q9HB19 425 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 ST3GAL6Q9Y274 331 aa12.84□□□□□ -0.35
ATG4B-220ENST00000482507 AKIRIN2Q53H80 203 aa12.83□□□□□ -0.35
ATG4B-220ENST00000482507 FAM76BQ5HYJ3 339 aa12.83□□□□□ -0.35
ATG4B-220ENST00000482507 LIAT1Q6ZQX7 453 aa12.83□□□□□ -0.35
ATG4B-220ENST00000482507 LHFPL2Q6ZUX7 228 aa12.83□□□□□ -0.35
ATG4B-220ENST00000482507 CALHM1Q8IU99 346 aa12.83□□□□□ -0.35
ATG4B-220ENST00000482507 HPSE2Q8WWQ2 592 aa12.83□□□□□ -0.35
ATG4B-220ENST00000482507 OR2H1Q9GZK4 316 aa12.83□□□□□ -0.35
ATG4B-220ENST00000482507 COA4Q9NYJ1 87 aa12.83□□□□□ -0.35
ATG4B-220ENST00000482507 KCNIP3Q9Y2W7 256 aa12.83□□□□□ -0.35
ATG4B-220ENST00000482507 STARD10Q9Y365 291 aa12.83□□□□□ -0.35
ATG4B-220ENST00000482507 DMXL2Q8TDJ6 3036 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 NSG1A0A0A6YYJ2 146 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 MED19A0JLT2 244 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-220ENST00000482507 E5RGE8 158 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 CARD18P57730 90 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 SRSF6Q13247 344 aaKnown RBP12.83□□□□□ -0.36
ATG4B-220ENST00000482507 CEACAM16Q2WEN9 425 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 MIDNQ504T8 468 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 AVPI1Q5T686 147 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 AAED1Q7RTV5 226 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 TMPRSS7Q7RTY8 843 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 SKA3Q8IX90 412 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 IL22RA1Q8N6P7 574 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 LRTM2Q8N967 370 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 CPT1CQ8TCG5 803 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 P4HTMQ9NXG6 502 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 NSG2Q9Y328 171 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 TIMM10BQ9Y5J6 103 aa12.83□□□□□ -0.36
ATG4B-220ENST00000482507 EDN3P14138 238 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 AADACP22760 399 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 PPT1P50897 306 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 NHLH2Q02577 135 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 Q0VFX4 171 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 PEA15Q15121 130 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 OR14L1PQ8NHC6 308 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 TP53RKQ96S44 253 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 CLCC1Q96S66 551 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 FOXB1Q99853 325 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 BCO1Q9HAY6 547 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 PIEZO1Q92508 2521 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 LRRC3CA6NJW4 275 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 DANCRP0C864 163 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 SNCAP37840 140 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 NPBWR2P48146 333 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 ASCL1P50553 236 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 SWI5Q1ZZU3 235 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 PIGCQ92535 297 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 MOB3AQ96BX8 217 aa12.82□□□□□ -0.36
ATG4B-220ENST00000482507 ADGRG7Q96K78 797 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms